Bug #3169: PlotSpecif, R, broken pipe error - Plateforme TXM - Forge du Centre Blaise Pascal

Bug #3169

PlotSpecif, R, broken pipe error

Ajouté par Matthieu Decorde il y a presque 4 ans. Mis à jour il y a plus d'un an.

Statut:

Closed

Début:

08/10/2021

Priorité:

High

Echéance:

Assigné à:

% réalisé:

100%

Catégorie:

Stats / R

Temps passé:

Version cible:

TXM 0.8.3

Description

(BP 2021-06-29 VM Windows 10, TXM 0.8.2 2021-06-18 15h00, TXM 0.8.1.202106181500) Pb d'exécution, j'obtiens la stacktrace suivante :

Compiling SpecificitiesFileMacro.groovy...
Exécution du script Groovy SpecificitiesFileMacro.groovy…
C:\Program Files\TXM-0.8.2beta
f    F    t    T    mode    comp    sign    P(f')    P(f'<>mode)    specificity    specif
java.net.SocketException: Connection reset
    at java.net.SocketInputStream.read(Unknown Source)
    at java.net.SocketInputStream.read(Unknown Source)
    at java.net.SocketInputStream.read(Unknown Source)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:213)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:180)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:250)
    at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:231)
    at org.txm.statsengine.r.core.RWorkspace.safeEval(RWorkspace.java:1557)
    at org.txm.statsengine.r.core.RWorkspace.eval(RWorkspace.java:1142)
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:435)
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:398)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.runtime.callsite.PlainObjectMetaMethodSite.doInvoke(PlainObjectMetaMethodSite.java:43)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro$_run_closure1.doCall(SpecificitiesFileMacro.groovy:58)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:104)
    at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:326)
    at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:264)
    at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
    at groovy.lang.Closure.call(Closure.java:421)
    at groovy.lang.Closure.call(Closure.java:437)
    at org.codehaus.groovy.runtime.DefaultGroovyMethods.callClosureForLine(DefaultGroovyMethods.java:5936)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro.run(SpecificitiesFileMacro.groovy:40)
    at org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run(ExecuteGroovyScript.java:268)
    at org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
org.rosuda.REngine.Rserve.RserveException: eval failed
    at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:234)
    at org.txm.statsengine.r.core.RWorkspace.safeEval(RWorkspace.java:1557)
    at org.txm.statsengine.r.core.RWorkspace.eval(RWorkspace.java:1142)
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:435)
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:398)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro$_run_closure1.doCall(SpecificitiesFileMacro.groovy:58)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:104)
    at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:326)
    at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:264)
    at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
    at groovy.lang.Closure.call(Closure.java:421)
    at groovy.lang.Closure.call(Closure.java:437)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro.run(SpecificitiesFileMacro.groovy:40)
    at org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run(ExecuteGroovyScript.java:268)
    at org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
java.lang.NullPointerException
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:437)
    at org.txm.statsengine.r.core.RWorkspace.plot(RWorkspace.java:398)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro$_run_closure1.doCall(SpecificitiesFileMacro.groovy:58)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:104)
    at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:326)
    at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:264)
    at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
    at groovy.lang.Closure.call(Closure.java:421)
    at groovy.lang.Closure.call(Closure.java:437)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro.run(SpecificitiesFileMacro.groovy:40)
    at org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run(ExecuteGroovyScript.java:268)
    at org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
java.net.SocketException: Connection reset by peer: socket write error
    at java.net.SocketOutputStream.socketWrite0(Native Method)
    at java.net.SocketOutputStream.socketWrite(Unknown Source)
    at java.net.SocketOutputStream.write(Unknown Source)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:205)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:180)
    at org.rosuda.REngine.Rserve.protocol.RTalk.request(RTalk.java:250)
    at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:231)
    at org.txm.statsengine.r.core.RWorkspace.safeEval(RWorkspace.java:1557)
    at org.txm.statsengine.r.core.RWorkspace.eval(RWorkspace.java:1142)
    at org.txm.statsengine.r.core.RWorkspace$eval$0.call(Unknown Source)
    at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:128)
    at org.txm.macro.r.SpecificitiesFileMacro$_run_closure1.doCall(SpecificitiesFileMacro.groovy:61)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:104)
    at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:326)
    at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:264)
    at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
    at groovy.lang.Closure.call(Closure.java:421)
    at groovy.lang.Closure.call(Closure.java:437)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro.run(SpecificitiesFileMacro.groovy:40)
    at org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run(ExecuteGroovyScript.java:268)
    at org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
org.rosuda.REngine.Rserve.RserveException: eval failed
    at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:234)
    at org.txm.statsengine.r.core.RWorkspace.safeEval(RWorkspace.java:1557)
    at org.txm.statsengine.r.core.RWorkspace.eval(RWorkspace.java:1142)
    at org.txm.statsengine.r.core.RWorkspace$eval$0.call(Unknown Source)
    at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:116)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:128)
    at org.txm.macro.r.SpecificitiesFileMacro$_run_closure1.doCall(SpecificitiesFileMacro.groovy:61)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.lang.reflect.Method.invoke(Unknown Source)
    at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:104)
    at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:326)
    at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:264)
    at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
    at groovy.lang.Closure.call(Closure.java:421)
    at groovy.lang.Closure.call(Closure.java:437)
    ...
    at org.txm.macro.r.SpecificitiesFileMacro.run(SpecificitiesFileMacro.groovy:40)
    at org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run(ExecuteGroovyScript.java:268)
    at org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
** Erreur lors de l'exécution du script : java.lang.NullPointerException: Cannot invoke method asDouble() on null object
Stacktrace: 
[1]  org.txm.rcp.handlers.scripts.ExecuteGroovyScript$1.run  ExecuteGroovyScript.java, 279

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