FibrilTool : an ImageJ plug-in to quantify fibrillar structures¶
Arezki Boudaoud, Agata Burian, Dorota Borowska-Wykręt, Magalie Uyttewaal, Roman Wrzalik, Dorota Kwiatkowska & Olivier Hamant, FibrilTool : an ImageJ plug-in to quantify fibrillar structures in raw microscopy images, Nature Protocols. Feb 2014, Vol. 9 Issue 2, p457, 7 p. DOI: 10.1038/nprot.2014.024
Contents of the repository¶
- Boudaoud2014.pdf --> Boudaoud et al, Nature Protocol, 2014
- FibrilTool.txt --> original ImageJ plugin, published in Boudaoud2014.pdf
- FibrilTool2.ijm --> modified by Jean-Francois Gilles
- Fibril_Tool_Batch.ijm --> an automated version of FibrilTool (Marion Louveaux). The user draws and saves all ROI first and then he lets the macro compute
automatically microtubule orientation on the set of ROIs. - Fibril_Tool_Batch_read_me.pdf --> documentation for the above automated version.