Révision 711
tmp/org.txm.searchengine.cqp.rcp/plugin.xml (revision 711) | ||
---|---|---|
138 | 138 |
</command> |
139 | 139 |
</menuContribution> |
140 | 140 |
<menuContribution |
141 |
locationURI="popup:org.txm.rcp.views.corpora.CorporaView?after=org.txm.rcp.corporaview.corpus.manage"> |
|
142 |
<command |
|
143 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreateSubCorpus" |
|
144 |
icon="icons/functions/subcorpus.png" |
|
145 |
style="push"> |
|
146 |
<visibleWhen |
|
147 |
checkEnabled="false"> |
|
148 |
<reference |
|
149 |
definitionId="OneCorpusSelected"> |
|
150 |
</reference> |
|
151 |
</visibleWhen> |
|
152 |
</command> |
|
153 |
<command |
|
154 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreatePartition" |
|
155 |
icon="icons/functions/partition.png" |
|
156 |
style="push"> |
|
157 |
<visibleWhen |
|
158 |
checkEnabled="false"> |
|
159 |
<reference |
|
160 |
definitionId="OneCorpusSelected"> |
|
161 |
</reference> |
|
162 |
</visibleWhen> |
|
163 |
</command> |
|
164 |
</menuContribution> |
|
165 |
<menuContribution |
|
141 | 166 |
locationURI="menu:menu.file.export"> |
142 | 167 |
<command |
143 | 168 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.ExportCorpus" |
... | ... | |
154 | 179 |
</command> |
155 | 180 |
</menuContribution> |
156 | 181 |
<menuContribution |
182 |
locationURI="menu:menu.corpus?after=menu.corpus.build"> |
|
183 |
<command |
|
184 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreateSubCorpus" |
|
185 |
icon="icons/functions/subcorpus.png" |
|
186 |
style="push"> |
|
187 |
<visibleWhen |
|
188 |
checkEnabled="false"> |
|
189 |
<reference |
|
190 |
definitionId="OneCorpusSelected"> |
|
191 |
</reference> |
|
192 |
</visibleWhen> |
|
193 |
</command> |
|
194 |
<command |
|
195 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreatePartition" |
|
196 |
icon="icons/functions/partition.png" |
|
197 |
style="push"> |
|
198 |
<visibleWhen |
|
199 |
checkEnabled="false"> |
|
200 |
<reference |
|
201 |
definitionId="OneCorpusSelected"> |
|
202 |
</reference> |
|
203 |
</visibleWhen> |
|
204 |
</command> |
|
205 |
</menuContribution> |
|
206 |
<menuContribution |
|
157 | 207 |
allPopups="true" |
158 | 208 |
locationURI="toolbar:org.txm.rcp.toolbarfile"> |
159 | 209 |
<command |
... | ... | |
171 | 221 |
</command> |
172 | 222 |
</menuContribution> |
173 | 223 |
<menuContribution |
174 |
locationURI="toolbar:org.txm.rcp.toolbarcorpus?after=org.txm.synopticedition.rcp.handlers.OpenEdition">
|
|
224 |
locationURI="toolbar:org.txm.rcp.toolbarcorpus?after=org.txm.rcp.toolbarcorpus.corpus">
|
|
175 | 225 |
<command |
176 | 226 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreateSubCorpus" |
177 | 227 |
icon="icons/functions/subcorpus.png" |
... | ... | |
196 | 246 |
</visibleWhen> |
197 | 247 |
</command> |
198 | 248 |
</menuContribution> |
199 |
<menuContribution |
|
200 |
locationURI="popup:org.txm.rcp.views.corpora.CorporaView?after=org.txm.rcp.corporaview.corpus.manage"> |
|
201 |
<command |
|
202 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreateSubCorpus" |
|
203 |
icon="icons/functions/subcorpus.png" |
|
204 |
style="push"> |
|
205 |
<visibleWhen |
|
206 |
checkEnabled="false"> |
|
207 |
<reference |
|
208 |
definitionId="OneCorpusSelected"> |
|
209 |
</reference> |
|
210 |
</visibleWhen> |
|
211 |
</command> |
|
212 |
<command |
|
213 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreatePartition" |
|
214 |
icon="icons/functions/partition.png" |
|
215 |
style="push"> |
|
216 |
<visibleWhen |
|
217 |
checkEnabled="false"> |
|
218 |
<reference |
|
219 |
definitionId="OneCorpusSelected"> |
|
220 |
</reference> |
|
221 |
</visibleWhen> |
|
222 |
</command> |
|
223 |
</menuContribution> |
|
224 |
<menuContribution |
|
225 |
locationURI="menu:menu.corpus?after=menu.corpus.build"> |
|
226 |
<command |
|
227 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreateSubCorpus" |
|
228 |
icon="icons/functions/subcorpus.png" |
|
229 |
style="push"> |
|
230 |
<visibleWhen |
|
231 |
checkEnabled="false"> |
|
232 |
<reference |
|
233 |
definitionId="OneCorpusSelected"> |
|
234 |
</reference> |
|
235 |
</visibleWhen> |
|
236 |
</command> |
|
237 |
<command |
|
238 |
commandId="org.txm.searchengine.cqp.rcp.handlers.base.CreatePartition" |
|
239 |
icon="icons/functions/partition.png" |
|
240 |
style="push"> |
|
241 |
<visibleWhen |
|
242 |
checkEnabled="false"> |
|
243 |
<reference |
|
244 |
definitionId="OneCorpusSelected"> |
|
245 |
</reference> |
|
246 |
</visibleWhen> |
|
247 |
</command> |
|
248 |
</menuContribution> |
|
249 | 249 |
</extension> |
250 | 250 |
<extension |
251 | 251 |
point="org.eclipse.ui.preferencePages"> |
tmp/org.txm.specificities.core/src/org/txm/specificities/core/functions/Specificities.java (revision 711) | ||
---|---|---|
37 | 37 |
import java.util.Arrays; |
38 | 38 |
import java.util.List; |
39 | 39 |
|
40 |
import org.rosuda.REngine.REXP; |
|
40 | 41 |
import org.txm.core.results.Parameter; |
41 | 42 |
import org.txm.core.results.TXMParameters; |
42 | 43 |
import org.txm.core.results.TXMResult; |
... | ... | |
55 | 56 |
import org.txm.utils.logger.Log; |
56 | 57 |
|
57 | 58 |
/** |
58 |
* Holds specificities computation result.
|
|
59 |
* Compute specificities indexes using a {@link LexicalTable}
|
|
59 | 60 |
* |
61 |
* for alternative and test usages, the Specificities.computeIndex(...) method can be used. |
|
62 |
* |
|
60 | 63 |
* @author mdecorde |
61 | 64 |
* @author sloiseau |
62 | 65 |
* |
... | ... | |
129 | 132 |
this.lexicalTable = lexicalTable; |
130 | 133 |
} |
131 | 134 |
|
135 |
/** |
|
136 |
* Utility method to compute the specificity index of a word in a subcorpus. |
|
137 |
* <br> |
|
138 |
* Calls the R specificities function with a matrix built with the parameters |
|
139 |
* <pre> |
|
140 |
* f F-f |
|
141 |
* t-f T-t-F+f |
|
142 |
* </pre> |
|
143 |
* |
|
144 |
* @param f word frequency in subcorpus |
|
145 |
* @param F word frequency in corpus |
|
146 |
* @param t subcorpus size |
|
147 |
* @param T corpus size |
|
148 |
* @return the specificity index |
|
149 |
* @throws Exception |
|
150 |
*/ |
|
151 |
public static double computeIndex(int f, int F, int t, int T) throws Exception { |
|
152 |
RWorkspace rw = RWorkspace.getRWorkspaceInstance(); |
|
153 |
rw.voidEval("library(textometry)"); |
|
154 |
REXP rez = rw.eval("specificities(matrix(c("+f+", "+(t-f)+", "+(F-f)+", "+(T-t-F+f)+"), ncol=2))"); |
|
155 |
if (rez != null) return rez.asDoubles()[0]; |
|
156 |
return 0.0d; |
|
157 |
} |
|
158 |
|
|
132 | 159 |
@Override |
133 | 160 |
protected boolean _compute() throws Exception { |
134 | 161 |
|
tmp/org.txm.lexicaltable.core/src/org/txm/lexicaltable/core/functions/LexicalTable.java (revision 711) | ||
---|---|---|
29 | 29 |
import org.txm.statsengine.r.core.exceptions.RWorkspaceException; |
30 | 30 |
|
31 | 31 |
/** |
32 |
* ILexicalTable logic + TXMResult management methods
|
|
32 |
* Holds the word frequencies table of a {@link Partition} seen through a word property.
|
|
33 | 33 |
* |
34 |
* |
|
34 | 35 |
* @author mdecorde |
35 | 36 |
* |
36 | 37 |
*/ |
... | ... | |
39 | 40 |
public static Integer LEXICALTABLE_COUNTER = new Integer(1); |
40 | 41 |
public static String SYMBOL_BASE = "LexicalTable_"; //$NON-NLS-1$ |
41 | 42 |
|
42 |
/** the statengine data object */
|
|
43 |
/** stores the R table computed */
|
|
43 | 44 |
protected ILexicalTable statsData; |
44 |
|
|
45 |
|
|
46 |
|
|
47 |
|
|
45 |
/** stores the R table already computed. the _compute method won't update the result*/ |
|
46 |
protected ILexicalTable alreadyComputedStatsData; |
|
47 |
|
|
48 | 48 |
/** |
49 | 49 |
* The property. |
50 | 50 |
*/ |
... | ... | |
69 | 69 |
protected boolean pUseAllOccurrences; |
70 | 70 |
|
71 | 71 |
/** |
72 |
* Build a LexicalTable result with an already computed frequency R table |
|
72 | 73 |
* |
73 | 74 |
* @param corpus |
74 | 75 |
* @param analysisProperty |
... | ... | |
77 | 78 |
public LexicalTable(Corpus corpus, Property analysisProperty, ILexicalTable itable) { |
78 | 79 |
super(corpus); |
79 | 80 |
this.pProperty = analysisProperty; |
80 |
this.statsData = itable;
|
|
81 |
this.alreadyComputedStatsData = itable;
|
|
81 | 82 |
} |
82 | 83 |
|
83 | 84 |
|
84 | 85 |
/** |
86 |
* Build a LexicalTable with the {@link Subcorpus} words and {@link Subcorpus} parent remaining words. |
|
85 | 87 |
* |
86 | 88 |
* @param corpus |
87 |
* @param analysisProperty |
|
89 |
* @param analysisProperty the property to count
|
|
88 | 90 |
* @throws Exception |
89 | 91 |
*/ |
90 |
public LexicalTable(Corpus corpus, Property analysisProperty) throws Exception {
|
|
92 |
public LexicalTable(Subcorpus corpus, Property analysisProperty) throws Exception {
|
|
91 | 93 |
this(corpus, analysisProperty, null); |
92 | 94 |
} |
93 | 95 |
|
94 | 96 |
/** |
97 |
* Build a LexicalTable with the Subcorpus words and Subcorpus parent remaining words. |
|
95 | 98 |
* |
96 | 99 |
* @param corpus |
97 | 100 |
* @throws Exception |
98 | 101 |
*/ |
99 |
public LexicalTable(Corpus corpus) throws Exception {
|
|
102 |
public LexicalTable(Subcorpus corpus) throws Exception {
|
|
100 | 103 |
this(corpus, corpus.getDefaultProperty()); |
101 | 104 |
} |
102 | 105 |
|
... | ... | |
154 | 157 |
private LexicalTable(TXMResult parent, Property analysisProperty, int fMin, int vMax, boolean useAllOccurrences, ILexicalTable iTable) { |
155 | 158 |
super(parent); |
156 | 159 |
this.setParameters(analysisProperty, fMin, vMax, useAllOccurrences); |
157 |
this.statsData = iTable;
|
|
160 |
this.alreadyComputedStatsData = iTable;
|
|
158 | 161 |
} |
159 | 162 |
|
160 | 163 |
|
... | ... | |
347 | 350 |
@Override |
348 | 351 |
protected boolean _compute() throws Exception { |
349 | 352 |
|
350 |
if (this.parent instanceof Subcorpus) { |
|
353 |
this.statsData = null; // reset frequencies |
|
354 |
|
|
355 |
if (alreadyComputedStatsData != null) { |
|
356 |
this.statsData = alreadyComputedStatsData; |
|
357 |
} |
|
358 |
else if (this.parent instanceof Subcorpus) { |
|
351 | 359 |
|
352 | 360 |
this.subTask("Computing from Subcorpus."); |
353 | 361 |
|
... | ... | |
374 | 382 |
this._computeFromIndexes(Arrays.asList((Index)this.parent)); |
375 | 383 |
} |
376 | 384 |
|
385 |
if (this.statsData == null) { // no statsData computed or given |
|
386 |
return false; |
|
387 |
} |
|
388 |
|
|
377 | 389 |
//this.statsData.filter(this.pVMaxFilter, this.pfMinFilter); |
378 | 390 |
// FIXME old version |
379 | 391 |
this.statsData.cut(this.pVMaxFilter); |
tmp/org.txm.internalview.rcp/plugin.xml (revision 711) | ||
---|---|---|
12 | 12 |
point="org.eclipse.ui.menus"> |
13 | 13 |
<menuContribution |
14 | 14 |
allPopups="false" |
15 |
locationURI="toolbar:org.txm.rcp.toolbartools?after=ComputeInformationFromCorpus">
|
|
15 |
locationURI="toolbar:org.txm.rcp.toolbarcorpus?after=org.txm.information.rcp.handlers.ComputeInformation">
|
|
16 | 16 |
<command |
17 | 17 |
commandId="org.txm.internalview.rcp.handlers.ComputeInternalView" |
18 | 18 |
icon="icons/internal_view.png" |
... | ... | |
27 | 27 |
</menuContribution> |
28 | 28 |
<menuContribution |
29 | 29 |
allPopups="false" |
30 |
locationURI="popup:org.txm.rcp.views.corpora.CorporaView?after=org.txm.rcp.corporaview.corpus.read">
|
|
30 |
locationURI="popup:org.txm.rcp.views.corpora.CorporaView?after=org.txm.information.rcp.handlers.ComputeInformation">
|
|
31 | 31 |
<command |
32 | 32 |
commandId="org.txm.internalview.rcp.handlers.ComputeInternalView" |
33 | 33 |
icon="icons/internal_view.png" |
... | ... | |
41 | 41 |
</command> |
42 | 42 |
</menuContribution> |
43 | 43 |
<menuContribution |
44 |
locationURI="menu:menu.corpus?after=menu.corpus.read">
|
|
44 |
locationURI="menu:menu.corpus?after=org.txm.information.rcp.handlers.ComputeInformation">
|
|
45 | 45 |
<command |
46 | 46 |
commandId="org.txm.internalview.rcp.handlers.ComputeInternalView" |
47 | 47 |
icon="icons/internal_view.png" |
tmp/org.txm.searchengine.core/src/org/txm/searchengine/core/SearchEngines.java (revision 711) | ||
---|---|---|
34 | 34 |
} catch(Exception e) { |
35 | 35 |
System.out.println("Error: fail to instanciate "+contributions[i].getName()+": "+e.getLocalizedMessage()); |
36 | 36 |
e.printStackTrace(); |
37 |
}
|
|
37 |
} |
|
38 | 38 |
} |
39 | 39 |
|
40 | 40 |
return engines.size() > 0; |
tmp/org.txm.synopticeditor.rcp/plugin.xml (revision 711) | ||
---|---|---|
27 | 27 |
</menuContribution> |
28 | 28 |
<menuContribution |
29 | 29 |
allPopups="true" |
30 |
locationURI="toolbar:org.txm.rcp.toolbarcorpus"> |
|
30 |
locationURI="toolbar:org.txm.rcp.toolbarcorpus?after=org.txm.rcp.toolbarcorpus.read">
|
|
31 | 31 |
<command |
32 | 32 |
commandId="org.txm.synopticedition.rcp.handlers.OpenEdition" |
33 | 33 |
icon="icons/objects/edition.png" |
tmp/org.txm.rcp/src/main/java/org/txm/rcp/handlers/scripts/ExecuteGroovyScript.java (revision 711) | ||
---|---|---|
201 | 201 |
selections = null; |
202 | 202 |
} |
203 | 203 |
|
204 |
String tmp = Toolbox.getTXMHOMEPATH() + "/scripts"; //$NON-NLS-1$
|
|
205 |
if (previousScriptRootDir == null || !tmp.equals(previousScriptRootDir)) { |
|
206 |
previousScriptRootDir = tmp; |
|
207 |
gse = null; |
|
208 |
//System.out.println("SCRIPT ROOT DIR CHANGED tmp="+tmp); |
|
209 |
} |
|
204 |
// //$NON-NLS-1$
|
|
205 |
// if (previousScriptRootDir == null || !tmp.equals(previousScriptRootDir)) {
|
|
206 |
// previousScriptRootDir = tmp;
|
|
207 |
// gse = null;
|
|
208 |
// //System.out.println("SCRIPT ROOT DIR CHANGED tmp="+tmp);
|
|
209 |
// }
|
|
210 | 210 |
|
211 |
String scriptsRootDirectories = Toolbox.getTXMHOMEPATH() + "/scripts"; |
|
211 | 212 |
String dir = currentRootDir.getAbsolutePath(); |
212 | 213 |
String path = scriptfile.getAbsolutePath(); |
213 | 214 |
if (!path.startsWith(dir)) { |
... | ... | |
216 | 217 |
} |
217 | 218 |
final String relativepath = path.substring(dir.length()+1); |
218 | 219 |
|
219 |
if (gse == null) { |
|
220 |
gse = buildGSE(previousScriptRootDir, scriptfile);
|
|
220 |
//if (gse == null) {
|
|
221 |
gse = buildGSE(scriptsRootDirectories, scriptfile);
|
|
221 | 222 |
if (gse == null) { |
222 | 223 |
System.out.println("Could not create the Groovy script engine. Aborting."); |
223 | 224 |
return; |
224 | 225 |
} |
225 |
} |
|
226 |
//}
|
|
226 | 227 |
|
227 | 228 |
JobHandler jobhandler = new JobHandler(NLS.bind(TXMUIMessages.ExecuteRScript_1,scriptfile.getName())) { |
228 | 229 |
@Override |
... | ... | |
243 | 244 |
|
244 | 245 |
System.out.println(NLS.bind(TXMUIMessages.ExecuteRScript_1, scriptfile.getName())); |
245 | 246 |
long time = System.currentTimeMillis(); |
247 |
System.out.println(relativepath); |
|
246 | 248 |
gse.run(relativepath, binding); |
247 | 249 |
|
248 | 250 |
System.out.println(TXMUIMessages.ExecuteRScript_2+(System.currentTimeMillis()-time)+TXMUIMessages.ExecuteGroovyScript_0); |
tmp/org.txm.rcp/plugin.xml (revision 711) | ||
---|---|---|
1300 | 1300 |
<menuContribution |
1301 | 1301 |
allPopups="true" |
1302 | 1302 |
locationURI="toolbar:org.eclipse.ui.main.toolbar"> |
1303 |
<separator |
|
1304 |
name="org.txm.rcp.toolbars.begin" |
|
1305 |
visible="false"> |
|
1306 |
</separator> |
|
1303 | 1307 |
<toolbar |
1304 | 1308 |
id="org.txm.rcp.toolbars.result"> |
1305 | 1309 |
<command |
... | ... | |
1356 | 1360 |
</or> |
1357 | 1361 |
</visibleWhen> |
1358 | 1362 |
</command> |
1363 |
</toolbar> |
|
1364 |
<separator |
|
1365 |
name="org.txm.rcp.toolbar.separator1" |
|
1366 |
visible="false"> |
|
1367 |
</separator> |
|
1368 |
<toolbar |
|
1369 |
id="org.txm.rcp.toolbarcorpus"> |
|
1370 |
<separator |
|
1371 |
name="org.txm.rcp.toolbarcorpus.read" |
|
1372 |
visible="false"> |
|
1373 |
</separator> |
|
1359 | 1374 |
<command |
1360 | 1375 |
commandId="org.txm.rcp.commands.base.DeleteObject?after=org.txm.information.rcp.handlers.ComputeInformation" |
1361 | 1376 |
icon="icons/functions/Delete.png" |
... | ... | |
1391 | 1406 |
</or> |
1392 | 1407 |
</visibleWhen> |
1393 | 1408 |
</command> |
1394 |
</toolbar> |
|
1395 |
<separator |
|
1396 |
name="org.txm.rcp.toolbar.separator1" |
|
1397 |
visible="true"> |
|
1398 |
</separator> |
|
1399 |
<toolbar |
|
1400 |
id="org.txm.rcp.toolbarcorpus"> |
|
1401 | 1409 |
|
1402 | 1410 |
<separator |
1403 | 1411 |
name="org.txm.rcp.toolbarcorpus.corpus" |
1404 |
visible="true">
|
|
1412 |
visible="false">
|
|
1405 | 1413 |
</separator> |
1406 | 1414 |
<separator |
1407 | 1415 |
name="org.txm.rcp.toolbarcorpus.annotation" |
1408 |
visible="true">
|
|
1416 |
visible="false">
|
|
1409 | 1417 |
</separator> |
1410 | 1418 |
</toolbar> |
1411 | 1419 |
<separator |
... | ... | |
1979 | 1987 |
name="org.txm.rcp.corporaview.corpus.read" |
1980 | 1988 |
visible="true"> |
1981 | 1989 |
</separator> |
1982 |
<separator |
|
1983 |
name="org.txm.rcp.corporaview.corpus.manage" |
|
1984 |
visible="true"> |
|
1985 |
</separator> |
|
1986 | 1990 |
|
1987 | 1991 |
<command |
1988 | 1992 |
commandId="org.txm.rcp.commands.base.DeleteObject" |
... | ... | |
2019 | 2023 |
</visibleWhen> |
2020 | 2024 |
</command> |
2021 | 2025 |
<separator |
2026 |
name="org.txm.rcp.corporaview.corpus.manage" |
|
2027 |
visible="true"> |
|
2028 |
</separator> |
|
2029 |
<separator |
|
2022 | 2030 |
name="org.txm.rcp.corporaview.annotation" |
2023 | 2031 |
visible="true"> |
2024 | 2032 |
</separator> |
Formats disponibles : Unified diff