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package org.txm.chartsengine.jfreechart.core;
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import java.awt.BasicStroke;
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import java.awt.Color;
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import java.awt.Graphics2D;
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import java.awt.geom.Rectangle2D;
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import java.awt.image.BufferedImage;
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import java.io.FileOutputStream;
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import java.io.FileWriter;
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import java.io.IOException;
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import java.text.DecimalFormat;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.List;
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import org.eclipse.core.runtime.Platform;
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import org.jfree.chart.ChartFactory;
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import org.jfree.chart.JFreeChart;
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import org.jfree.chart.annotations.XYAnnotation;
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import org.jfree.chart.annotations.XYLineAnnotation;
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import org.jfree.chart.annotations.XYTextAnnotation;
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import org.jfree.chart.axis.NumberAxis;
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import org.jfree.chart.axis.ValueAxis;
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import org.jfree.chart.plot.CategoryPlot;
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import org.jfree.chart.plot.Marker;
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import org.jfree.chart.plot.PlotOrientation;
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import org.jfree.chart.plot.ValueMarker;
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import org.jfree.chart.plot.XYPlot;
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import org.jfree.data.category.CategoryDataset;
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import org.jfree.data.category.DefaultCategoryDataset;
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import org.jfree.data.general.DatasetUtilities;
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import org.jfree.data.general.PieDataset;
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import org.jfree.data.xy.IntervalXYDataset;
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import org.jfree.data.xy.XYDataset;
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import org.jfree.data.xy.XYSeries;
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import org.jfree.data.xy.XYSeriesCollection;
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import org.jfree.graphics2d.svg.SVGGraphics2D;
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import org.jfree.ui.RectangleAnchor;
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import org.jfree.ui.TextAnchor;
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import org.txm.chartsengine.core.ChartsEngine;
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import org.txm.chartsengine.jfreechart.core.datasets.FCAXYDataset;
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import org.txm.chartsengine.jfreechart.core.preferences.JFCChartsEnginePreferences;
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import org.txm.chartsengine.jfreechart.core.renderers.MultipleItemsSelector;
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import org.txm.chartsengine.jfreechart.core.renderers.interfaces.IItemSelectionRenderer;
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import org.txm.chartsengine.jfreechart.core.themes.base.ExtendedNumberAxis;
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import org.txm.chartsengine.jfreechart.core.themes.base.SymbolAxisBetweenTicks;
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import org.txm.chartsengine.jfreechart.core.themes.base.Theme;
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import org.txm.chartsengine.jfreechart.core.themes.highcharts.defaulttheme.HighchartsDefaultTheme;
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import org.txm.chartsengine.jfreechart.core.themes.highcharts.defaulttheme.renderers.FCAItemSelectionRenderer;
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import org.txm.core.chartsengine.base.messages.ChartsEngineMessages;
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import org.txm.core.chartsengine.jfreechart.messages.JFreeChartsEngineMessages;
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import org.txm.core.preferences.TXMPreferences;
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import org.txm.functions.ca.CA;
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import org.txm.functions.classification.CAH;
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import org.txm.functions.progression.Progression;
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import org.txm.functions.specificities.SpecificitesResult;
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import org.txm.searchengine.cqp.corpus.query.Query;
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import org.txm.stat.StatException;
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import org.txm.utils.logger.Log;
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import com.lowagie.text.Document;
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import com.lowagie.text.Rectangle;
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/**
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* The charts engine description.
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*/
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public final static String DESCRIPTION = JFreeChartsEngineMessages.JFCChartsEngine_ENGINE_DESCRIPTION;
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public final static String DESCRIPTION = "Java";
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/**
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* The rendering theme.
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this(TXMPreferences.getString(JFCChartsEnginePreferences.PREFERENCE_NODE, JFCChartsEnginePreferences.OUTPUT_FORMAT));
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}
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/**
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* Add some borders to the limits of the specified XY plot.
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* @param plot
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*/
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public static void createCAFactorialMapChartLimitsBorder(JFreeChart chart) {
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XYPlot plot = chart.getXYPlot();
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// Remove all existent annotations
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for(int i = plot.getAnnotations().size() - 1; i >= 0; i--) {
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plot.removeAnnotation((XYAnnotation) plot.getAnnotations().get(i));
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}
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// Gets the extreme coordinates values
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double minX = 0, maxX = 0, minY = 0, maxY = 0;
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// FIXME: new version
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// minX = plot.getDataRange(plot.getDomainAxis()).getLowerBound();
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// maxX = plot.getDataRange(plot.getDomainAxis()).getUpperBound();
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//
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// minY = plot.getDataRange(plot.getRangeAxis()).getLowerBound();
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// maxY = plot.getDataRange(plot.getRangeAxis()).getUpperBound();
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// FIXME: old version, to remove when new version will be validated
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// Rows
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if(plot.getRenderer().isSeriesVisible(0)) {
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minX = ((FCAXYDataset)plot.getDataset()).getMinX(0);
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}
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// Cols
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if(plot.getRenderer().isSeriesVisible(1)) {
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double tmpMinX = ((FCAXYDataset)plot.getDataset()).getMinX(1);
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if(tmpMinX < minX) {
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minX = tmpMinX;
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}
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}
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// Rows
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if(plot.getRenderer().isSeriesVisible(0)) {
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maxX = ((FCAXYDataset)plot.getDataset()).getMaxX(0);
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}
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// Cols
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if(plot.getRenderer().isSeriesVisible(1)) {
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double tmpMaxX = ((FCAXYDataset)plot.getDataset()).getMaxX(1);
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if(tmpMaxX > maxX) {
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maxX = tmpMaxX;
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}
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}
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// Rows
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if(plot.getRenderer().isSeriesVisible(0)) {
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minY = ((FCAXYDataset)plot.getDataset()).getMinY(0);
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}
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// Cols
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if(plot.getRenderer().isSeriesVisible(1)) {
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double tmpMinY = ((FCAXYDataset)plot.getDataset()).getMinY(1);
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if(tmpMinY < minY) {
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minY = tmpMinY;
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}
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}
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// Rows
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if(plot.getRenderer().isSeriesVisible(0)) {
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maxY = ((FCAXYDataset)plot.getDataset()).getMaxY(0);
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}
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// Cols
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if(plot.getRenderer().isSeriesVisible(1)) {
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double tmpMaxY = ((FCAXYDataset)plot.getDataset()).getMaxY(1);
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if(tmpMaxY > maxY) {
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maxY = tmpMaxY;
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}
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}
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// Add some margins to the border
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// FIXME : to compute according to the real series shape dimensions
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// The code below doesn't work
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// double shapeHalfWidth = chart.getXYPlot().getRenderer().getSeriesShape(0).getBounds2D().getWidth() / 2;
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double shapeHalfWidth = 0.02;
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minX -= shapeHalfWidth;
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maxX += shapeHalfWidth;
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minY -= shapeHalfWidth;
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maxY += shapeHalfWidth;
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// Create the border
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BasicStroke dashedStroke = new BasicStroke(0.5f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1f, new float[] {2f}, 0f);
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XYLineAnnotation annotation;
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Color borderColor = Color.GRAY;
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// Left border
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annotation = new XYLineAnnotation(minX, minY, minX, maxY, dashedStroke, borderColor);
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plot.addAnnotation(annotation);
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// Right border
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annotation = new XYLineAnnotation(maxX, minY, maxX, maxY, dashedStroke, borderColor);
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plot.addAnnotation(annotation);
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// Bottom border
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annotation = new XYLineAnnotation(minX, minY, maxX, minY, dashedStroke, borderColor);
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plot.addAnnotation(annotation);
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// Top border
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annotation = new XYLineAnnotation(minX, maxY, maxX, maxY, dashedStroke, borderColor);
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plot.addAnnotation(annotation);
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}
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/**
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* Creates an XY line chart from the specified dataset.
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* @param dataset
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// Domain axis symbols instead of values
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if(domainAxisSymbols != null) {
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chart.getXYPlot().setDomainAxis(new SymbolAxisBetweenTicks(ChartsEngineMessages.ChartsEngine_PARTITION_DIMENSIONS_X_AXIS_LABEL, domainAxisSymbols));
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chart.getXYPlot().setDomainAxis(new SymbolAxisBetweenTicks(xAxisLabel, domainAxisSymbols));
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}
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// Apply theme to the chart
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}
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/**
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* Creates a FCA scatter plot from the specified dataset.
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* @param dataset
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* @return the JFreeChart chart
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*/
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public JFreeChart createCAFactorialMapChart(FCAXYDataset dataset, String title, String xAxisLabel, String yAxisLabel) {
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JFreeChart chart = ChartFactory.createScatterPlot(title, xAxisLabel, yAxisLabel, dataset, PlotOrientation.VERTICAL, true, false, false);
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// Add some borders to the limits of the CA
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JFCChartsEngine.createCAFactorialMapChartLimitsBorder(chart);
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// Custom renderer
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chart.getXYPlot().setRenderer(this.theme.createFCARenderer());
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return chart;
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}
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@Override
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public JFreeChart createCAFactorialMapChart(CA ca) {
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JFreeChart chart = null;
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try {
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FCAXYDataset dataset = new FCAXYDataset(ca);
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DecimalFormat f = new DecimalFormat("###.00"); //$NON-NLS-1$
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double singularValuesSum = ca.getValeursPropresSum();
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String percent1 = f.format(100 * ca.getValeursPropres()[ca.getFirstDimension() - 1] / singularValuesSum);
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String axis1 = ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + ca.getFirstDimension() + " (" + percent1 + "%)";
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String percent2 = f.format(100 * ca.getValeursPropres()[ca.getSecondDimension() - 1] / singularValuesSum);
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String axis2 = ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + ca.getSecondDimension() + " (" + percent2 + "%)";
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chart = this.createCAFactorialMapChart(dataset, this.createCAFactorialMapChartTitle(ca), axis1, axis2);
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}
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catch(StatException e) {
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Log.severe("Can't create CA factorial map scatter plot" + e);
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}
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// Apply theme to the chart
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this.theme.apply(chart);
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return chart;
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}
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@Override
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public File createCAFactorialMapChartFile(CA ca, File file) {
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return this.export(this.createCAFactorialMapChart(ca), file);
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}
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| 611 |
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@Override
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public JFreeChart createCASingularValuesBarChart(CA ca) {
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JFreeChart chart = null;
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| 616 |
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try {
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| 618 |
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// Creating the data set from the CA result
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DefaultCategoryDataset dataset = new DefaultCategoryDataset();
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double[] singularValues = ca.getValeursPropres();
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for(int i = 0; i < singularValues.length; i++) {
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dataset.setValue(singularValues[i], ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_TOOLTIP_Y_LABEL, ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_X_LABELS_PREFIX + String.valueOf(i + 1));
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}
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| 625 |
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| 626 |
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// Create the chart
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| 627 |
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chart = this.createCategoryBarChart(dataset, ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_TITLE, ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_X_AXIS_LABEL, ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_Y_AXIS_LABEL, false, false, false);
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| 628 |
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| 629 |
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// Custom renderer
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chart.getCategoryPlot().setRenderer(this.theme.createCASingularValuesRenderer());
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((IItemSelectionRenderer) chart.getCategoryPlot().getRenderer()).getItemsSelector().setResultData(ca);
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| 632 |
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// Custom range axis for ticks drawing options
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chart.getCategoryPlot().setRangeAxis(new ExtendedNumberAxis((NumberAxis) chart.getCategoryPlot().getRangeAxis(), false, true, 0, DatasetUtilities.findMaximumRangeValue(chart.getCategoryPlot().getDataset()).doubleValue()));
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| 635 |
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| 636 |
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}
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catch(StatException e) {
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| 638 |
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Log.severe(ChartsEngineMessages.ChartsEngine_CA_SINGULAR_VALUES_CANT_CREATE_CHART + e);
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| 639 |
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}
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| 640 |
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| 641 |
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// Apply theme to the chart
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this.theme.apply(chart);
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| 644 |
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return chart;
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| 645 |
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}
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| 646 |
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| 647 |
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| 648 |
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@Override
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| 649 |
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public File createCASingularValuesBarChartFile(CA ca, File file) {
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| 650 |
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return this.export(this.createCASingularValuesBarChart(ca), file);
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| 651 |
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}
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| 652 |
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| 653 |
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| 654 |
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// FIXME: old version with bar plot renderer
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| 655 |
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@Override
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| 656 |
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public JFreeChart createCAH2dChart(CAH cah) {
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| 657 |
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| 658 |
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| 659 |
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JFreeChart chart = null;
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| 660 |
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| 661 |
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// Creating the data set from the result
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| 662 |
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DefaultCategoryDataset dataset = new DefaultCategoryDataset();
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| 663 |
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String category = "cluster ";
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| 664 |
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| 665 |
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| 666 |
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| 667 |
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int[] clusterNumbers = cah.getClusterNumbers();
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| 668 |
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String[] rowNames = cah.getClusterRowNames();
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| 669 |
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String[] orderedRowNames = cah.getClusterOrderedRowNames();
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| 670 |
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double[] clusterHeights = cah.getClusterTreeHeights();
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| 671 |
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double[][] clusterMerges = cah.getClusterTreeMerges();
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| 672 |
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double[][] clusterCoords = cah.getClusterCoords();
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| 673 |
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| 674 |
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double[] yValuesByOrderedRowNames = new double[rowNames.length];
|
| 675 |
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double[] clusterNumbersValuesByOrderedRowNames = new double[rowNames.length];
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| 676 |
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|
| 677 |
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|
| 678 |
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|
| 679 |
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// FIXME: Sort the cluster numbers in reverse order
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| 680 |
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// Arrays.sort(clusterNumbers);
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| 681 |
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// ArrayUtils.reverse(clusterNumbers);
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| 682 |
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// System.out.println(Arrays.toString(clusterNumbers));
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| 683 |
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| 684 |
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| 685 |
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// FIXME: tests row names
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| 686 |
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//System.err.println("JFCChartsEngine.createCAH2dChart(): cluster row names: \t\t" + Arrays.toString(rowNames));
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| 687 |
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| 688 |
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// FIXME: tests ordered row names
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| 689 |
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//System.err.println("JFCChartsEngine.createCAH2dChart(): cluster ordered row names: \t" + Arrays.toString(orderedRowNames));
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| 690 |
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| 691 |
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// FIXME: tests, ordered cluster numbers
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| 692 |
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//System.err.println("JFCChartsEngine.createCAH2dChart(): cluster numbers: \t\t" + Arrays.toString(clusterNumbers));
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| 693 |
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| 694 |
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// FIXME: tests, cluster tree merges
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| 695 |
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//System.err.println("JFCChartsEngine.createCAH2dChart(): cluster tree merges: \t\t" + Arrays.toString(clusterMerges));
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| 696 |
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| 697 |
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// FIXME: tests, heights
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| 698 |
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// System.err.println("JFCChartsEngine.createCAH2dChart(): cluster heights: \t\t" + Arrays.toString(clusterHeights));
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| 699 |
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| 700 |
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| 701 |
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// FIXME: tests
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| 702 |
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System.err.println("JFCChartsEngine.createCAH2dChart(): tests: \t\t" + Arrays.toString(cah.getInertiaGains()));
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| 703 |
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| 704 |
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| 705 |
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| 706 |
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System.out.println("JFCChartsEngine.createCAH2dChart() cluster heights count: " + clusterHeights.length);
|
| 707 |
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for(int i = 0; i < clusterHeights.length; i++) {
|
| 708 |
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System.out.println("JFCChartsEngine.createCAH2dChart() cluster height: " + new DecimalFormat("0.00000000000000000").format(clusterHeights[i]));
|
| 709 |
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}
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| 710 |
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| 711 |
429 |
//
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| 712 |
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// String[] clusterUnorderedRowNames = cah.getClusterRowNames();
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| 713 |
|
// for(int i = 0; i < clusterUnorderedRowNames.length; i++) {
|
| 714 |
|
// System.out.println("JFCChartsEngine.createCAH2dChart() unordered row names " + i + " : " + clusterUnorderedRowNames[i]);
|
| 715 |
|
// }
|
| 716 |
|
|
| 717 |
|
// Parse the merge pairs
|
| 718 |
|
// A negative number in the FactoMineR tree merge table means a singleton
|
| 719 |
|
for (int i = 0 ; i < clusterMerges.length ; i++) {
|
| 720 |
|
|
| 721 |
|
// FIXME: debug
|
| 722 |
|
//for (int j = 0 ; j < clusterMerges.length ; j++) {
|
| 723 |
|
System.err.println("JFCChartsEngine.createCAH2dChart(): cluster tree merges: \t\t" + Arrays.toString(clusterMerges[i]));
|
| 724 |
|
System.err.println("JFCChartsEngine.createCAH2dChart(): row names: \t\t" + rowNames[(int) Math.abs(clusterMerges[i][0]) - 1] + " | " + rowNames[(int) Math.abs(clusterMerges[i][1]) - 1]);
|
| 725 |
|
|
| 726 |
|
|
| 727 |
|
//}
|
| 728 |
|
|
| 729 |
|
// Leaves pair
|
| 730 |
|
if(clusterMerges[i][0] < 0) {
|
| 731 |
|
|
| 732 |
|
//System.err.print("JFCChartsEngine.createCAH2dChart(): merging: " + rowNames[(int) Math.abs(clusterMerge[i][0]) - 1]);
|
| 733 |
|
|
| 734 |
|
// Put the height in the ordered by names values table
|
| 735 |
|
for(int j = 0; j < orderedRowNames.length; j++) {
|
| 736 |
|
if(orderedRowNames[j].equals(rowNames[(int) Math.abs(clusterMerges[i][0]) - 1])) {
|
| 737 |
|
yValuesByOrderedRowNames[j] = clusterHeights[i];
|
| 738 |
|
//clusterNumbersValuesByOrderedRowNames[j] = clusterNumbers[(int) Math.abs(clusterMerge[i][0]) - 1];
|
| 739 |
|
}
|
| 740 |
|
}
|
| 741 |
|
|
| 742 |
|
}
|
| 743 |
|
// Non-singleton
|
| 744 |
|
// else {
|
| 745 |
|
// //System.err.print("JFCChartsEngine.createCAH2dChart(): merging aggregation: " + clusterMerge[i][0]);
|
| 746 |
|
// }
|
| 747 |
|
|
| 748 |
|
// Leaves pair
|
| 749 |
|
if(clusterMerges[i][1] < 0) {
|
| 750 |
|
//System.err.print(" with: " + rowNames[(int) Math.abs(clusterMerge[i][1]) - 1]);
|
| 751 |
|
|
| 752 |
|
// Put the height in the ordered by names values table
|
| 753 |
|
for(int j = 0; j < orderedRowNames.length; j++) {
|
| 754 |
|
if(orderedRowNames[j].equals(rowNames[(int) Math.abs(clusterMerges[i][1]) - 1])) {
|
| 755 |
|
yValuesByOrderedRowNames[j] = clusterHeights[i];
|
| 756 |
|
//clusterNumbersValuesByOrderedRowNames[j] = clusterNumbers[(int) Math.abs(clusterMerge[i][1]) - 1];
|
| 757 |
|
}
|
| 758 |
|
|
| 759 |
|
}
|
| 760 |
|
|
| 761 |
|
}
|
| 762 |
|
// Non-singleton
|
| 763 |
|
// else {
|
| 764 |
|
// //System.err.print(" with aggregation: " + clusterMerge[i][1]);
|
| 765 |
|
// }
|
| 766 |
|
|
| 767 |
|
//System.err.println(" and height: " + clusterHeights[i] + " as aggregation: " + (i + 1));
|
| 768 |
|
|
| 769 |
|
}
|
| 770 |
|
|
| 771 |
|
|
| 772 |
|
//
|
| 773 |
|
// for (int i = 0 ; i < cah.getClusterTreeMerges().length; i++) {
|
| 774 |
|
// System.err.println("JFCChartsEngine.createCAH2dChart() merges : ");
|
| 775 |
|
// for(int j = 0; j < cah.getClusterTreeMerges()[i].length; j++) {
|
| 776 |
|
// System.err.print(" : " + cah.getClusterTreeMerges()[i][j]);
|
| 777 |
|
// }
|
| 778 |
|
// }
|
| 779 |
|
|
| 780 |
|
|
| 781 |
|
|
| 782 |
|
// ArrayList<Double> middlePoints = cah.getClusterTreeMiddlePoints();
|
|
430 |
// @Override
|
|
431 |
// public File createCAH2dChartFile(CAH cah, File file) {
|
|
432 |
// return this.export(this.createCAH2dChart(cah), file);
|
|
433 |
// }
|
| 783 |
434 |
//
|
| 784 |
|
// for (int i = 0 ; i < middlePoints.size(); i++) {
|
| 785 |
|
// System.err.println("JFCChartsEngine.createCAH2dChart() middle points X: " + middlePoints.get(i));
|
| 786 |
|
// }
|
| 787 |
|
|
| 788 |
|
|
| 789 |
|
|
| 790 |
|
// for (int i = 0 ; i < cah.getClusterCoords().length ; i++) {
|
| 791 |
|
// for(int j = 0; j < cah.getClusterCoords()[i].length; j++) {
|
| 792 |
|
// //System.err.println("JFCChartsEngine.createCAH2dChart(): " + cah.getClusterCoords()[i][j]);
|
| 793 |
|
// dataset.setValue(cah.getClusterCoords()[i][j], category + clusterNumbers[i], rownames[i]);
|
| 794 |
|
// }
|
| 795 |
|
// }
|
| 796 |
|
|
| 797 |
|
|
| 798 |
|
|
| 799 |
|
// Create chart title
|
| 800 |
|
String title = "title";
|
| 801 |
|
String xAxisLabel = "Column";
|
| 802 |
|
if(!cah.isColumnsComputing()) {
|
| 803 |
|
xAxisLabel = "Row";
|
| 804 |
|
}
|
| 805 |
|
|
| 806 |
|
|
| 807 |
|
|
| 808 |
|
// Create the data set
|
| 809 |
|
// FIXME: bar plot test
|
| 810 |
|
// for(int i = 0; i < yValuesByOrderedRowNames.length; i++) {
|
| 811 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[clusterNumbers.length - 1 - i], orderedRowNames[i]);
|
| 812 |
435 |
//
|
| 813 |
|
//
|
| 814 |
|
// dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[yValuesByOrderedRowNames.length - 1 - i], orderedRowNames[i]);
|
| 815 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[i], orderedRowNames[i]);
|
| 816 |
|
//
|
| 817 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbersValuesByOrderedRowNames[i], orderedRowNames[i]);
|
| 818 |
|
// }
|
| 819 |
|
//
|
| 820 |
|
// // Create the chart
|
| 821 |
|
// chart = this.createCategoryBarChart(dataset, title, xAxisLabel, "Height", false, false, false);
|
| 822 |
|
// ((IItemSelectionRenderer) chart.getCategoryPlot().getRenderer()).setChartType(ChartsEngine.CHART_TYPE_CAH_2D);
|
| 823 |
|
//
|
| 824 |
|
// // Draw tree
|
| 825 |
|
// for(int j = 0; j < chart.getCategoryPlot().getDataset().getColumnCount() - 1; j++) {
|
| 826 |
|
// //System.err.println("JFCChartsEngine.createCAH2dChart(): " + chart.getCategoryPlot().getDataset().getColumnKey(j));
|
| 827 |
|
//
|
| 828 |
|
//
|
| 829 |
|
// // Non-singleton pairs lines
|
| 830 |
|
// if(yValuesByOrderedRowNames[j] == yValuesByOrderedRowNames[j + 1]) {
|
| 831 |
|
// chart.getCategoryPlot().addAnnotation(new CategoryLineAnnotation(chart.getCategoryPlot().getDataset().getColumnKey(j), yValuesByOrderedRowNames[j],
|
| 832 |
|
// chart.getCategoryPlot().getDataset().getColumnKey(j + 1), yValuesByOrderedRowNames[j + 1], Color.red, new BasicStroke(2.0f)));
|
| 833 |
|
// }
|
| 834 |
|
//
|
| 835 |
|
//
|
| 836 |
|
// //chart.getCategoryPlot().addAnnotation(new Cate
|
| 837 |
|
//
|
| 838 |
|
//
|
| 839 |
|
//
|
| 840 |
|
// }
|
| 841 |
|
|
| 842 |
|
|
| 843 |
|
|
| 844 |
|
// Create the data set
|
| 845 |
|
// FIXME: step chart test
|
| 846 |
|
// for(int i = 0; i < yValuesByOrderedRowNames.length - 1; i++) {
|
| 847 |
|
// if(yValuesByOrderedRowNames[i] == yValuesByOrderedRowNames[i + 1]) {
|
| 848 |
|
// dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[yValuesByOrderedRowNames.length - 1 - i], orderedRowNames[i]);
|
| 849 |
|
// }
|
| 850 |
|
// }
|
| 851 |
|
//// dataset.addValue(0, "test", "truc 1");
|
| 852 |
|
//// dataset.addValue(0.5, "test", "truc 1");
|
| 853 |
|
//// dataset.addValue(0.9, "test", "truc 1");
|
| 854 |
|
// // Create the chart
|
| 855 |
|
// chart = this.createCategoryStepChart(dataset, title, xAxisLabel, "Height", false, false);
|
| 856 |
|
// ((IItemSelectionRenderer) chart.getCategoryPlot().getRenderer()).setChartType(ChartsEngine.CHART_TYPE_CAH_2D);
|
| 857 |
|
|
| 858 |
|
|
| 859 |
|
// Create the data set
|
| 860 |
|
// FIXME: XY category bar chart test
|
| 861 |
|
XYSeriesCollection dataset2 = new XYSeriesCollection();
|
| 862 |
|
|
| 863 |
|
// Last tree level (leaves level)
|
| 864 |
|
XYSeries series = new XYSeries("leaves");
|
| 865 |
|
for(int i = 0; i < yValuesByOrderedRowNames.length - 1; i++) {
|
| 866 |
|
series.add(i, 0);
|
| 867 |
|
series.add(i, yValuesByOrderedRowNames[i]);
|
| 868 |
|
if(yValuesByOrderedRowNames[i] == yValuesByOrderedRowNames[i + 1]) {
|
| 869 |
|
series.add(i + 1, yValuesByOrderedRowNames[i]);
|
| 870 |
|
series.add(i + 1, 0);
|
| 871 |
|
}
|
| 872 |
|
else {
|
| 873 |
|
series.add(i + 1, null);
|
| 874 |
|
}
|
| 875 |
|
}
|
| 876 |
|
dataset2.addSeries(series);
|
| 877 |
|
|
| 878 |
|
|
| 879 |
|
// Link singletons to non singleton
|
| 880 |
|
series = new XYSeries("singleton to non singleton links");
|
| 881 |
|
for(int i = clusterHeights.length; i >= 0; i--) {
|
| 882 |
|
|
| 883 |
|
// Skip non singletons case
|
| 884 |
|
if(i > 3 && yValuesByOrderedRowNames[i] == yValuesByOrderedRowNames[i - 1] && yValuesByOrderedRowNames[i - 2] == yValuesByOrderedRowNames[i - 3]) {
|
| 885 |
|
continue;
|
| 886 |
|
}
|
| 887 |
|
|
| 888 |
|
// Link singletons to non singleton
|
| 889 |
|
if(i > 1 && yValuesByOrderedRowNames[i] == yValuesByOrderedRowNames[i - 1] && yValuesByOrderedRowNames[i - 1] != yValuesByOrderedRowNames[i - 2]) {
|
| 890 |
|
series.add(i - 0.5, yValuesByOrderedRowNames[i - 2]);
|
| 891 |
|
series.add(i - 0.5, yValuesByOrderedRowNames[i]);
|
| 892 |
|
series.add(i - 0.5, null);
|
| 893 |
|
series.add(i - 2, yValuesByOrderedRowNames[i - 2]);
|
| 894 |
|
}
|
| 895 |
|
}
|
| 896 |
|
dataset2.addSeries(series);
|
| 897 |
|
|
| 898 |
|
// Link singletons to newly created pairs
|
| 899 |
|
series = new XYSeries("singleton to newly created pairs");
|
| 900 |
|
for(int i = clusterHeights.length; i >= 0; i--) {
|
| 901 |
|
|
| 902 |
|
// Skip non singletons case
|
| 903 |
|
if(i > 0 && yValuesByOrderedRowNames[i] == yValuesByOrderedRowNames[i - 1]) {
|
| 904 |
|
series.add(i, null);
|
| 905 |
|
continue;
|
| 906 |
|
}
|
| 907 |
|
|
| 908 |
|
// Link singletons to newly created pairs
|
| 909 |
|
if(i < clusterHeights.length - 1 && yValuesByOrderedRowNames[i] != yValuesByOrderedRowNames[i + 1]
|
| 910 |
|
&& yValuesByOrderedRowNames[i + 1] != yValuesByOrderedRowNames[i + 2]
|
| 911 |
|
|
| 912 |
|
// && i > 1 &&
|
| 913 |
|
|
| 914 |
|
) {
|
| 915 |
|
|
| 916 |
|
series.add(i, null);
|
| 917 |
|
|
| 918 |
|
series.add(i, yValuesByOrderedRowNames[i]);
|
| 919 |
|
|
| 920 |
|
series.add(i + 1.75, yValuesByOrderedRowNames[i]);
|
| 921 |
|
series.add(i + 1.75, yValuesByOrderedRowNames[i + 1]);
|
| 922 |
|
|
| 923 |
|
|
| 924 |
|
//series.add(i - 2, yValuesByOrderedRowNames[i - 2]);
|
| 925 |
|
}
|
| 926 |
|
}
|
| 927 |
|
dataset2.addSeries(series);
|
| 928 |
|
|
| 929 |
|
|
| 930 |
|
|
| 931 |
|
// Link singletons; test 2
|
| 932 |
|
// series = new XYSeries("singleton links");
|
| 933 |
|
// for(int i = 0; i < clusterHeights.length - 2; i++) {
|
| 934 |
|
// if(i > 0 && i < clusterHeights.length - 2 && yValuesByOrderedRowNames[i] != yValuesByOrderedRowNames[i + 1] && yValuesByOrderedRowNames[i] != yValuesByOrderedRowNames[i - 1]) {
|
| 935 |
|
// series.add(i, yValuesByOrderedRowNames[i]);
|
| 936 |
|
// series.add(i + 1.5, yValuesByOrderedRowNames[i]);
|
| 937 |
|
// series.add(i + 1.5, yValuesByOrderedRowNames[i + 1]);
|
| 938 |
|
// series.add(i + 1.5, null);
|
| 939 |
|
// }
|
| 940 |
|
// }
|
| 941 |
|
// dataset2.addSeries(series);
|
| 942 |
|
|
| 943 |
|
|
| 944 |
|
// // Other clusters
|
| 945 |
|
// ArrayList<Double> otherClusters = new ArrayList<Double>();
|
| 946 |
|
// //series = new XYSeries("other clusters");
|
| 947 |
|
// for(int i = 0; i < clusterHeights.length; i++) {
|
| 948 |
|
// // If not a leaf
|
| 949 |
|
// boolean done = false;
|
| 950 |
|
// for(int j = 0; j < clusterNumbersValuesByOrderedRowNames.length; j++) {
|
| 951 |
|
// if(clusterHeights[i] == yValuesByOrderedRowNames[j]) {
|
| 952 |
|
// done = true;
|
| 953 |
|
// break;
|
| 954 |
|
// }
|
| 955 |
|
// }
|
| 956 |
|
// if(done) {
|
| 957 |
|
// continue;
|
| 958 |
|
// }
|
| 959 |
|
// System.err.println("JFCChartsEngine.createCAH2dChart() other clusters: " + new DecimalFormat("0.0000000000000000").format(clusterHeights[i]));
|
| 960 |
|
// }
|
| 961 |
|
// //dataset2.addSeries(series);
|
| 962 |
|
|
| 963 |
|
|
| 964 |
|
|
| 965 |
|
// dataset.addValue(0, "test", "truc 1");
|
| 966 |
|
// dataset.addValue(0.5, "test", "truc 1");
|
| 967 |
|
// dataset.addValue(0.9, "test", "truc 1");
|
| 968 |
|
// Create the chart
|
| 969 |
|
//chart = this.createXYBarChart(dataset2, title, xAxisLabel, "Height", false, false);
|
| 970 |
|
chart = ChartFactory.createXYLineChart(
|
| 971 |
|
title, // chart title
|
| 972 |
|
xAxisLabel, // x axis label
|
| 973 |
|
"height", // y axis label
|
| 974 |
|
dataset2, // data
|
| 975 |
|
PlotOrientation.VERTICAL,
|
| 976 |
|
true, // include legend
|
| 977 |
|
true, // tooltips
|
| 978 |
|
false // urls
|
| 979 |
|
);
|
| 980 |
|
|
| 981 |
|
|
| 982 |
|
|
| 983 |
|
|
| 984 |
|
chart.getXYPlot().setRenderer(this.theme.createXYLineAndShapeRenderer(true, false));
|
| 985 |
|
((IItemSelectionRenderer) chart.getXYPlot().getRenderer()).setChartType(ChartsEngine.CHART_TYPE_CAH_2D);
|
| 986 |
|
|
| 987 |
|
|
| 988 |
|
//chart.getXYPlot().addAnnotation(new XYLineAnnotation(0.5, yValuesByOrderedRowNames[0], 0.5, yValuesByOrderedRowNames[0] + 0.002));
|
| 989 |
|
|
| 990 |
|
|
| 991 |
|
|
| 992 |
|
|
| 993 |
|
|
| 994 |
|
|
| 995 |
|
|
| 996 |
|
|
| 997 |
|
//System.err.println("JFCChartsEngine.createCAH2dChart() " + chart.getCategoryPlot().getCategories().get(0));
|
| 998 |
|
//chart.getCategoryPlot().addAnnotation(new CategoryLineAnnotation("1970-12-31", .0002, "1965-12-31", .00005, Color.red, new BasicStroke(2.0f)));
|
| 999 |
|
|
| 1000 |
|
// Custom range axis for ticks drawing options
|
| 1001 |
|
//chart.getCategoryPlot().setRangeAxis(new ExtendedNumberAxis((NumberAxis) chart.getCategoryPlot().getRangeAxis(), false, true, 0, DatasetUtilities.findMaximumRangeValue(chart.getCategoryPlot().getDataset()).doubleValue()));
|
| 1002 |
|
|
| 1003 |
|
|
| 1004 |
|
|
| 1005 |
|
// Apply theme to the chart
|
| 1006 |
|
this.theme.apply(chart);
|
| 1007 |
|
|
| 1008 |
|
|
| 1009 |
|
|
| 1010 |
|
// FIXME: test algo R
|
| 1011 |
|
int dimens = 2;
|
| 1012 |
|
int ax1 = 0;
|
| 1013 |
|
int ax2 = 1;
|
| 1014 |
|
double x1, y1, x2, y2, w1, w2;
|
| 1015 |
|
|
| 1016 |
|
double h1, h2; // FIXME: when using 3 dimensions
|
| 1017 |
|
|
| 1018 |
|
|
| 1019 |
|
double[][] aa = new double[clusterMerges.length][4];
|
| 1020 |
|
for(int i = 0; i < clusterMerges.length; i++) {
|
| 1021 |
|
for(int j = 0; j < 4; j++) {
|
| 1022 |
|
aa[i][j] = 0;
|
| 1023 |
|
}
|
| 1024 |
|
}
|
| 1025 |
|
|
| 1026 |
|
|
| 1027 |
|
//aa=matrix(ncol=4, nrow=nrow(merge))
|
| 1028 |
|
|
| 1029 |
|
|
| 1030 |
|
|
| 1031 |
|
|
| 1032 |
|
// Decrement/increment the cluster merge value because the R algorithm uses 1 as first table index
|
| 1033 |
|
|
| 1034 |
|
for(int i = 0; i < clusterMerges.length; i++) {
|
| 1035 |
|
if(clusterMerges[i][0] < 0) {
|
| 1036 |
|
clusterMerges[i][0]++;
|
| 1037 |
|
}
|
| 1038 |
|
else {
|
| 1039 |
|
clusterMerges[i][0]--;
|
| 1040 |
|
}
|
| 1041 |
|
|
| 1042 |
|
if(clusterMerges[i][1] < 0) {
|
| 1043 |
|
clusterMerges[i][1]++;
|
| 1044 |
|
}
|
| 1045 |
|
else {
|
| 1046 |
|
clusterMerges[i][1]--;
|
| 1047 |
|
}
|
| 1048 |
|
}
|
| 1049 |
|
|
| 1050 |
|
|
| 1051 |
|
for(int i = 0; i < clusterMerges.length; i++) {
|
| 1052 |
|
|
| 1053 |
|
// for(i in 1:nrow(merge)){
|
| 1054 |
|
// if(merge[i,1]<0){
|
| 1055 |
|
// Singleton
|
| 1056 |
|
if(clusterMerges[i][0] < 0) {
|
| 1057 |
|
|
| 1058 |
|
|
| 1059 |
|
x1 = clusterCoords[(int) -clusterMerges[i][0]][ax1];
|
| 1060 |
|
y1 = clusterCoords[(int) -clusterMerges[i][0]][ax2];
|
| 1061 |
|
|
| 1062 |
|
|
| 1063 |
|
h1 = 0;
|
| 1064 |
|
w1 = 1;
|
| 1065 |
|
}
|
| 1066 |
|
else{
|
| 1067 |
|
x1 = aa[(int) clusterMerges[i][0]][0];
|
| 1068 |
|
y1 = aa[(int) clusterMerges[i][0]][1];
|
| 1069 |
|
w1 = aa[(int) clusterMerges[i][0]][3];
|
| 1070 |
|
h1 = aa[(int) clusterMerges[i][0]][2];
|
| 1071 |
|
}
|
| 1072 |
|
// Singleton
|
| 1073 |
|
if(clusterMerges[i][1] < 0) {
|
| 1074 |
|
//if(merge[i,2]<0){
|
| 1075 |
|
x2 = clusterCoords[-(int) clusterMerges[i][1]][ax1];
|
| 1076 |
|
y2 = clusterCoords[-(int) clusterMerges[i][1]][ax2];
|
| 1077 |
|
h2 = 0;
|
| 1078 |
|
w2 = 1;
|
| 1079 |
|
}
|
| 1080 |
|
else{
|
| 1081 |
|
x2 = aa[(int) clusterMerges[i][1]][0];
|
| 1082 |
|
y2 = aa[(int) clusterMerges[i][1]][1];
|
| 1083 |
|
w2 = aa[(int) clusterMerges[i][1]][3];
|
| 1084 |
|
h2 = aa[(int) clusterMerges[i][1]][2];
|
| 1085 |
|
}
|
| 1086 |
|
aa[i][0] = (w1 * x1 + w2 * x2) / (w1 + w2);
|
| 1087 |
|
aa[i][1] = (w1 * y1 + w2 * y2) / (w1 + w2);
|
| 1088 |
|
|
| 1089 |
|
//if(i<=nrow(merge)-t.level+1)
|
| 1090 |
|
if(i <= clusterMerges.length) {
|
| 1091 |
|
clusterHeights[i] = 0;
|
| 1092 |
|
}
|
| 1093 |
|
|
| 1094 |
|
aa[i][2] = clusterHeights[i];
|
| 1095 |
|
aa[i][3] = w1 + w2;
|
| 1096 |
|
|
| 1097 |
|
// if(i>(nrow(merge)-t.level+1)){
|
| 1098 |
|
// if(i > clusterMerges[i][1]){ // FIXME: this test is strange
|
| 1099 |
|
// if(dimens==3) s$points3d(rbind(c(x1,y1,h1),c(x1,y1,height[i]), c(x2,y2,height[i]),c(x2,y2,h2)), lty=1, type="o", pch="")
|
| 1100 |
|
if(dimens == 2) {
|
| 1101 |
|
// lines(c(x1,x2), c(y1,y2), lwd=(height[i]/max(height))*3)
|
| 1102 |
|
|
| 1103 |
|
//chart.getXYPlot().addAnnotation(new XYLineAnnotation(x1, y1, x2, y2));
|
| 1104 |
|
// tests with steps lines
|
| 1105 |
|
x1 *= 10;
|
| 1106 |
|
x2 *= 10;
|
| 1107 |
|
y1 /= 100;
|
| 1108 |
|
y2 /= 100;
|
| 1109 |
|
|
| 1110 |
|
chart.getXYPlot().addAnnotation(new XYLineAnnotation(x1, y1, x1, y2));
|
| 1111 |
|
chart.getXYPlot().addAnnotation(new XYLineAnnotation(x1, y2, x2, y2));
|
| 1112 |
|
chart.getXYPlot().addAnnotation(new XYLineAnnotation(x2, y2, x2, y1));
|
| 1113 |
|
|
| 1114 |
|
|
| 1115 |
|
// FIXME: labels tests
|
| 1116 |
|
chart.getXYPlot().addAnnotation(new XYTextAnnotation(rowNames[(int) Math.abs(clusterMerges[i][0])], x1, y1));
|
| 1117 |
|
chart.getXYPlot().addAnnotation(new XYTextAnnotation(rowNames[(int) Math.abs(clusterMerges[i][1])], x2, y1));
|
| 1118 |
|
|
| 1119 |
|
|
| 1120 |
|
|
| 1121 |
|
// chart.getXYPlot().addAnnotation(new XYLineAnnotation(y2, x1, y1, x1));
|
| 1122 |
|
|
| 1123 |
|
|
| 1124 |
|
//chart.getXYPlot().addAnnotation(new XYLineAnnotation(x2, y2, x2, y2));
|
| 1125 |
|
|
| 1126 |
|
|
| 1127 |
|
System.err.println("JFCChartsEngine.createCAH2dChart(): draw line " + x1 + ", " + y1 + " | " + x2 + "," + y2);
|
| 1128 |
|
}
|
| 1129 |
|
// }
|
| 1130 |
|
// }
|
| 1131 |
|
|
| 1132 |
|
|
| 1133 |
|
}
|
| 1134 |
|
|
| 1135 |
|
|
| 1136 |
|
// FIXME: test symbol axis
|
| 1137 |
|
//chart.getXYPlot().setDomainAxis(new SymbolAxis("test symbol axis", new String[]{"A", "b", "c"}));
|
| 1138 |
|
|
| 1139 |
|
// FIXME: for cluster boxes we may use XYBoxAnnotation()
|
| 1140 |
|
|
| 1141 |
|
|
| 1142 |
|
//chart.getXYPlot().addAnnotation(new XYLineAnnotation(x1, y1, x2, y2));
|
| 1143 |
|
|
| 1144 |
|
|
| 1145 |
|
return chart;
|
| 1146 |
|
|
| 1147 |
|
}
|
| 1148 |
|
|
| 1149 |
|
// FIXME: new version with category step renderer
|
| 1150 |
436 |
// @Override
|
| 1151 |
|
// public JFreeChart createCAH2dChart(CAH cah) {
|
|
437 |
// public JFreeChart createCAH3dChart(CAH cah) {
|
|
438 |
// // FIXME : tests CAH 3d
|
|
439 |
// return null;
|
|
440 |
// }
|
| 1152 |
441 |
//
|
| 1153 |
442 |
//
|
| 1154 |
|
// JFreeChart chart = null;
|
| 1155 |
|
//
|
| 1156 |
|
// // Creating the data set from the result
|
| 1157 |
|
// DefaultCategoryDataset dataset = new DefaultCategoryDataset();
|
| 1158 |
|
// String category = "cluster ";
|
| 1159 |
|
//
|
| 1160 |
|
//
|
| 1161 |
|
//
|
| 1162 |
|
// int[] clusterNumbers = cah.getClusterNumbers();
|
| 1163 |
|
// String[] rowNames = cah.getClusterRowNames();
|
| 1164 |
|
// String[] orderedRowNames = cah.getClusterOrderedRowNames();
|
| 1165 |
|
// double[] clusterHeights = cah.getClusterTreeHeights();
|
| 1166 |
|
// double[][] clusterMerge = cah.getClusterTreeMerges();
|
| 1167 |
|
//
|
| 1168 |
|
//
|
| 1169 |
|
// double[] yValuesByOrderedRowNames = new double[rowNames.length];
|
| 1170 |
|
// double[] clusterNumbersValuesByOrderedRowNames = new double[rowNames.length];
|
| 1171 |
|
//
|
| 1172 |
|
//
|
| 1173 |
|
//
|
| 1174 |
|
// // FIXME: Sort the cluster numbers in reverse order
|
| 1175 |
|
//// Arrays.sort(clusterNumbers);
|
| 1176 |
|
//// ArrayUtils.reverse(clusterNumbers);
|
| 1177 |
|
//// System.out.println(Arrays.toString(clusterNumbers));
|
| 1178 |
|
//
|
| 1179 |
|
//
|
| 1180 |
|
// // FIXME: tests row names
|
| 1181 |
|
// //System.err.println("JFCChartsEngine.createCAH2dChart(): cluster row names: \t\t" + Arrays.toString(rowNames));
|
| 1182 |
|
//
|
| 1183 |
|
// // FIXME: tests ordered row names
|
| 1184 |
|
// //System.err.println("JFCChartsEngine.createCAH2dChart(): cluster ordered row names: \t" + Arrays.toString(orderedRowNames));
|
| 1185 |
|
//
|
| 1186 |
|
// // FIXME: tests, ordered cluster numbers
|
| 1187 |
|
// //System.err.println("JFCChartsEngine.createCAH2dChart(): cluster number: \t\t" + Arrays.toString(clusterNumbers));
|
| 1188 |
|
//
|
| 1189 |
|
//
|
| 1190 |
|
//
|
| 1191 |
|
// for (int i = 0 ; i < clusterMerge.length ; i++) {
|
| 1192 |
|
//
|
| 1193 |
|
// // Singleton
|
| 1194 |
|
// if(clusterMerge[i][0] < 0) {
|
| 1195 |
|
//
|
| 1196 |
|
// //System.err.print("JFCChartsEngine.createCAH2dChart(): merging: " + rowNames[(int) Math.abs(clusterMerge[i][0]) - 1]);
|
| 1197 |
|
//
|
| 1198 |
|
// // Put the height in the ordered by names values table
|
| 1199 |
|
// for(int j = 0; j < orderedRowNames.length; j++) {
|
| 1200 |
|
// if(orderedRowNames[j].equals(rowNames[(int) Math.abs(clusterMerge[i][0]) - 1])) {
|
| 1201 |
|
// yValuesByOrderedRowNames[j] = clusterHeights[i];
|
| 1202 |
|
// //clusterNumbersValuesByOrderedRowNames[j] = clusterNumbers[(int) Math.abs(clusterMerge[i][0]) - 1];
|
| 1203 |
|
// }
|
| 1204 |
|
// }
|
| 1205 |
|
//
|
| 1206 |
|
// }
|
| 1207 |
|
// // Non-singleton
|
| 1208 |
|
// else {
|
| 1209 |
|
// //System.err.print("JFCChartsEngine.createCAH2dChart(): merging aggregation: " + clusterMerge[i][0]);
|
| 1210 |
|
// }
|
| 1211 |
|
//
|
| 1212 |
|
// // Singleton
|
| 1213 |
|
// if(clusterMerge[i][1] < 0) {
|
| 1214 |
|
// //System.err.print(" with: " + rowNames[(int) Math.abs(clusterMerge[i][1]) - 1]);
|
| 1215 |
|
//
|
| 1216 |
|
// // Put the height in the ordered by names values table
|
| 1217 |
|
// for(int j = 0; j < orderedRowNames.length; j++) {
|
| 1218 |
|
// if(orderedRowNames[j].equals(rowNames[(int) Math.abs(clusterMerge[i][1]) - 1])) {
|
| 1219 |
|
// yValuesByOrderedRowNames[j] = clusterHeights[i];
|
| 1220 |
|
// //clusterNumbersValuesByOrderedRowNames[j] = clusterNumbers[(int) Math.abs(clusterMerge[i][1]) - 1];
|
| 1221 |
|
// }
|
| 1222 |
|
//
|
| 1223 |
|
// }
|
| 1224 |
|
//
|
| 1225 |
|
// }
|
| 1226 |
|
// // Non-singleton
|
| 1227 |
|
// else {
|
| 1228 |
|
// //System.err.print(" with aggregation: " + clusterMerge[i][1]);
|
| 1229 |
|
// }
|
| 1230 |
|
//
|
| 1231 |
|
// //System.err.println(" and height: " + clusterHeights[i] + " as aggregation: " + (i + 1));
|
| 1232 |
|
//
|
| 1233 |
|
// }
|
| 1234 |
|
//
|
| 1235 |
|
//
|
| 1236 |
|
// // Create the data set
|
| 1237 |
|
//
|
| 1238 |
|
// for(int i = 0; i < yValuesByOrderedRowNames.length; i++) {
|
| 1239 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[clusterNumbers.length - 1 - i], orderedRowNames[i]);
|
| 1240 |
|
//
|
| 1241 |
|
// dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbers[yValuesByOrderedRowNames.length - 1 - i], orderedRowNames[i]);
|
| 1242 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category, orderedRowNames[i]);
|
| 1243 |
|
//
|
| 1244 |
|
// //dataset.setValue(yValuesByOrderedRowNames[i], category + clusterNumbersValuesByOrderedRowNames[i], orderedRowNames[i]);
|
| 1245 |
|
// }
|
| 1246 |
|
//
|
| 1247 |
|
////
|
| 1248 |
|
//// for (int i = 0 ; i < cah.getClusterTreeMerges().length; i++) {
|
| 1249 |
|
//// System.err.println("JFCChartsEngine.createCAH2dChart() merges : ");
|
| 1250 |
|
//// for(int j = 0; j < cah.getClusterTreeMerges()[i].length; j++) {
|
| 1251 |
|
//// System.err.print(" : " + cah.getClusterTreeMerges()[i][j]);
|
| 1252 |
|
//// }
|
| 1253 |
|
//// }
|
| 1254 |
|
//
|
| 1255 |
|
//
|
| 1256 |
|
//
|
| 1257 |
|
//// ArrayList<Double> middlePoints = cah.getClusterTreeMiddlePoints();
|
| 1258 |
|
////
|
| 1259 |
|
//// for (int i = 0 ; i < middlePoints.size(); i++) {
|
| 1260 |
|
//// System.err.println("JFCChartsEngine.createCAH2dChart() middle points X: " + middlePoints.get(i));
|
| 1261 |
|
//// }
|
| 1262 |
|
//
|
| 1263 |
|
//
|
| 1264 |
|
//
|
| 1265 |
|
//// for (int i = 0 ; i < cah.getClusterCoords().length ; i++) {
|
| 1266 |
|
//// for(int j = 0; j < cah.getClusterCoords()[i].length; j++) {
|
| 1267 |
|
//// //System.err.println("JFCChartsEngine.createCAH2dChart(): " + cah.getClusterCoords()[i][j]);
|
| 1268 |
|
//// dataset.setValue(cah.getClusterCoords()[i][j], category + clusterNumbers[i], rownames[i]);
|
| 1269 |
|
//// }
|
| 1270 |
|
//// }
|
| 1271 |
|
//
|
| 1272 |
|
//
|
| 1273 |
|
//
|
| 1274 |
|
// // Create chart title
|
| 1275 |
|
// String title = "title";
|
| 1276 |
|
// String xAxisLabel = "Column";
|
| 1277 |
|
// if(!cah.isColumnsComputing()) {
|
| 1278 |
|
// xAxisLabel = "Row";
|
| 1279 |
|
// }
|
| 1280 |
|
//
|
| 1281 |
|
//
|
| 1282 |
|
// // Create the chart
|
| 1283 |
|
// chart = this.createCategoryStepChart(dataset, title, xAxisLabel, "Height", false, false);
|
| 1284 |
|
//
|
| 1285 |
|
//
|
| 1286 |
|
// ((IItemSelectionRenderer) chart.getCategoryPlot().getRenderer()).setChartType(ChartsEngine.CHART_TYPE_CAH_2D);
|
| 1287 |
|
//
|
| 1288 |
|
//
|
| 1289 |
|
// // Draw tree
|
| 1290 |
|
// chart.getCategoryPlot().addAnnotation(new CategoryLineAnnotation(chart.getCategoryPlot().getDataset().getColumnKey(0), 5.0,
|
| 1291 |
|
// chart.getCategoryPlot().getDataset().getColumnKey(1), 8.0, Color.red, new BasicStroke(2.0f)));
|
| 1292 |
|
//
|
| 1293 |
|
// // Custom range axis for ticks drawing options: cut the range to minimum and maximum values
|
| 1294 |
|
// chart.getCategoryPlot().setRangeAxis(new ExtendedNumberAxis((NumberAxis) chart.getCategoryPlot().getRangeAxis(), false, true, 0, DatasetUtilities.findMaximumRangeValue(chart.getCategoryPlot().getDataset()).doubleValue()));
|
| 1295 |
|
//
|
| 1296 |
|
//
|
| 1297 |
|
// return chart;
|
| 1298 |
|
//
|
| 1299 |
|
//
|
| 1300 |
|
//
|
| 1301 |
|
//
|
|
443 |
// @Override
|
|
444 |
// public File createCAH3dChartFile(CAH cah, File file) {
|
|
445 |
// return this.export(this.createCAH3dChart(cah), file);
|
| 1302 |
446 |
// }
|
| 1303 |
447 |
|
| 1304 |
448 |
|
| 1305 |
|
@Override
|
| 1306 |
|
public File createCAH2dChartFile(CAH cah, File file) {
|
| 1307 |
|
return this.export(this.createCAH2dChart(cah), file);
|
| 1308 |
|
}
|
| 1309 |
449 |
|
| 1310 |
450 |
|
| 1311 |
|
@Override
|
| 1312 |
|
public JFreeChart createCAH3dChart(CAH cah) {
|
| 1313 |
|
// FIXME : tests CAH 3d
|
| 1314 |
|
return null;
|
| 1315 |
|
}
|
| 1316 |
|
|
| 1317 |
|
|
| 1318 |
|
@Override
|
| 1319 |
|
public File createCAH3dChartFile(CAH cah, File file) {
|
| 1320 |
|
return this.export(this.createCAH3dChart(cah), file);
|
| 1321 |
|
}
|
| 1322 |
|
|
| 1323 |
|
|
| 1324 |
|
|
| 1325 |
|
|
| 1326 |
451 |
// @Override
|
| 1327 |
452 |
// public JFreeChart createPartitionDimensionsChart(Partition partition, boolean sortPartsBySize) {
|
| 1328 |
453 |
//
|
| ... | ... | |
| 2235 |
1360 |
|
| 2236 |
1361 |
|
| 2237 |
1362 |
|
| 2238 |
|
@Override
|
| 2239 |
|
public void updateChartCAFactorialMapSetRowsVisible(Object chart, CA ca, boolean visible) {
|
| 2240 |
|
super.updateChartCAFactorialMapSetRowsVisible(chart, ca, visible);
|
| 2241 |
1363 |
|
| 2242 |
|
((JFreeChart) chart).getXYPlot().getRenderer().setSeriesVisible(0, visible);
|
| 2243 |
|
|
| 2244 |
|
// Update the limits border
|
| 2245 |
|
JFCChartsEngine.createCAFactorialMapChartLimitsBorder((JFreeChart) chart);
|
| 2246 |
|
|
| 2247 |
|
}
|
| 2248 |
|
|
| 2249 |
|
|
| 2250 |
|
@Override
|
| 2251 |
|
public void updateChartCAFactorialMapSetColumnsVisible(Object chart, CA ca, boolean visible) {
|
| 2252 |
|
super.updateChartCAFactorialMapSetColumnsVisible(chart, ca, visible);
|
| 2253 |
|
|
| 2254 |
|
((JFreeChart) chart).getXYPlot().getRenderer().setSeriesVisible(1, visible);
|
| 2255 |
|
|
| 2256 |
|
// Update the limits border
|
| 2257 |
|
JFCChartsEngine.createCAFactorialMapChartLimitsBorder((JFreeChart) chart);
|
| 2258 |
|
|
| 2259 |
|
}
|
| 2260 |
|
|
| 2261 |
|
|
| 2262 |
|
|
| 2263 |
|
@Override
|
| 2264 |
|
public void updateChartCAFactorialMapSetDimensions(Object chart, CA ca, int dimension1, int dimension2) {
|
| 2265 |
|
super.updateChartCAFactorialMapSetDimensions(chart, ca, dimension1, dimension2);
|
| 2266 |
|
|
| 2267 |
|
// Modify data set
|
| 2268 |
|
((FCAXYDataset) ((JFreeChart) chart).getXYPlot().getDataset()).setAxis1(dimension1);
|
| 2269 |
|
((FCAXYDataset) ((JFreeChart) chart).getXYPlot().getDataset()).setAxis2(dimension2);
|
| 2270 |
|
|
| 2271 |
|
// Update axis labels
|
| 2272 |
|
// FIXME : create a method in CA to directly get a singular value as percent ?
|
| 2273 |
|
try {
|
| 2274 |
|
double sinuglarValuesSum = ca.getValeursPropresSum();
|
| 2275 |
|
DecimalFormat f = new DecimalFormat("###.00"); //$NON-NLS-1$
|
| 2276 |
|
((JFreeChart) chart).getXYPlot().getDomainAxis().setLabel(ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + dimension1 + " (" + f.format(100 * ca.getValeursPropres()[dimension1 - 1] / sinuglarValuesSum) + "%)");
|
| 2277 |
|
((JFreeChart) chart).getXYPlot().getRangeAxis().setLabel(ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + dimension2 + " (" + f.format(100 * ca.getValeursPropres()[dimension2 - 1] / sinuglarValuesSum) + "%)");
|
| 2278 |
|
|
| 2279 |
|
// Refresh data set
|
| 2280 |
|
// FIXME : any way to fire a data set event rather than reassign the same data set ?
|
| 2281 |
|
((JFreeChart) chart).getXYPlot().setDataset(((JFreeChart) chart).getXYPlot().getDataset());
|
| 2282 |
|
// the code below doesn't neither center the view nor update the axes ticks of the new chart, continue tests
|
| 2283 |
|
//((JFreeChart) chart).setNotify(true);
|
| 2284 |
|
|
| 2285 |
|
|
| 2286 |
|
// Update the limits border
|
| 2287 |
|
JFCChartsEngine.createCAFactorialMapChartLimitsBorder((JFreeChart) chart);
|
| 2288 |
|
|
| 2289 |
|
}
|
| 2290 |
|
catch(StatException e) {
|
| 2291 |
|
// TODO Auto-generated catch block
|
| 2292 |
|
e.printStackTrace();
|
| 2293 |
|
}
|
| 2294 |
|
}
|
| 2295 |
|
|
| 2296 |
|
|
| 2297 |
|
@Override
|
| 2298 |
|
public void updateChartCAFactorialMapHighlightPoints(Object chart, boolean rows, String[] labels) {
|
| 2299 |
|
|
| 2300 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((FCAItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2301 |
|
|
| 2302 |
|
// Rows
|
| 2303 |
|
int series = 0;
|
| 2304 |
|
// Columns
|
| 2305 |
|
if(!rows) {
|
| 2306 |
|
series = 1;
|
| 2307 |
|
}
|
| 2308 |
|
selector.removeAllSelectedItems(series);
|
| 2309 |
|
int[] items = ((FCAXYDataset)((JFreeChart) chart).getXYPlot().getDataset()).getLabelIndices(series, labels);
|
| 2310 |
|
|
| 2311 |
|
for(int i = 0; i < items.length; i++) {
|
| 2312 |
|
selector.addSelectedItem(series, items[i]);
|
| 2313 |
|
}
|
| 2314 |
|
|
| 2315 |
|
((JFreeChart) chart).setNotify(true);
|
| 2316 |
|
}
|
| 2317 |
|
|
| 2318 |
|
|
| 2319 |
|
@Override
|
| 2320 |
|
public ArrayList<String> getCAFactorialMapChartSelectedRowPoints(Object chart) {
|
| 2321 |
|
return this.getCAFactorialMapChartSelectedPoints(chart, 0);
|
| 2322 |
|
}
|
| 2323 |
|
|
| 2324 |
|
@Override
|
| 2325 |
|
public ArrayList<String> getCAFactorialMapChartSelectedColumnPoints(Object chart) {
|
| 2326 |
|
return this.getCAFactorialMapChartSelectedPoints(chart, 1);
|
| 2327 |
|
}
|
| 2328 |
|
|
| 2329 |
|
/**
|
| 2330 |
|
* Gets the currently selected item in the specified series in the chart.
|
| 2331 |
|
* @param chart
|
| 2332 |
|
* @param series
|
| 2333 |
|
* @return
|
| 2334 |
|
*/
|
| 2335 |
|
public ArrayList<String> getCAFactorialMapChartSelectedPoints(Object chart, int series) {
|
| 2336 |
|
|
| 2337 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((FCAItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2338 |
|
ArrayList<String> pointLabels = new ArrayList<String>(selector.getSelectedItemsCount(series));
|
| 2339 |
|
|
| 2340 |
|
if(selector.getSelectedItemsCount(series) > 0) {
|
| 2341 |
|
|
| 2342 |
|
FCAXYDataset dataset = (FCAXYDataset) ((JFreeChart) chart).getXYPlot().getDataset();
|
| 2343 |
|
int[] selectedItems = selector.getSelectedItems(series);
|
| 2344 |
|
|
| 2345 |
|
for(int i = 0; i < selectedItems.length; i++) {
|
| 2346 |
|
pointLabels.add(dataset.getLabel(series, selectedItems[i]));
|
| 2347 |
|
}
|
| 2348 |
|
}
|
| 2349 |
|
return pointLabels;
|
| 2350 |
|
}
|
| 2351 |
|
|
| 2352 |
|
|
| 2353 |
|
@Override
|
| 2354 |
|
public ArrayList<Integer> getProgressionChartSelectedPointPositions(Object chart) {
|
| 2355 |
|
|
| 2356 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((IItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2357 |
|
ArrayList<Integer> pointPositionsInCorpora = new ArrayList<Integer>();
|
| 2358 |
|
|
| 2359 |
|
|
| 2360 |
|
// FIXME: returns all the point positions
|
| 2361 |
|
XYDataset dataset = ((JFreeChart) chart).getXYPlot().getDataset();
|
| 2362 |
|
for(int i = 0; i < selector.getSelectedSeries().length; i++) {
|
| 2363 |
|
int selectedSeries = selector.getSelectedSeries()[i];
|
| 2364 |
|
int[] selectedItemsInSeries = selector.getSelectedItems(selectedSeries) ;
|
| 2365 |
|
for(int j = 0; j < selectedItemsInSeries.length; j++) {
|
| 2366 |
|
// if it's the dummy last chart point, get the previous point position instead of ther last one
|
| 2367 |
|
if(selectedItemsInSeries[j] == dataset.getItemCount(selectedSeries) - 1) {
|
| 2368 |
|
pointPositionsInCorpora.add((int) (dataset.getXValue(selectedSeries, selectedItemsInSeries[j] - 1)));
|
| 2369 |
|
}
|
| 2370 |
|
else {
|
| 2371 |
|
pointPositionsInCorpora.add((int) (dataset.getXValue(selectedSeries, selectedItemsInSeries[j])));
|
| 2372 |
|
}
|
| 2373 |
|
}
|
| 2374 |
|
|
| 2375 |
|
}
|
| 2376 |
|
|
| 2377 |
|
// put the last selected point at the end of the list
|
| 2378 |
|
if(selector.getLastSelectedSeries() != -1 && selector.getLastSelectedItem() != -1) {
|
| 2379 |
|
int item = selector.getLastSelectedItem();
|
| 2380 |
|
// if it's the dummy last chart point, get the previous point position instead of ther last one
|
| 2381 |
|
if(item == dataset.getItemCount(selector.getLastSelectedSeries()) - 1) {
|
| 2382 |
|
item--;
|
| 2383 |
|
}
|
| 2384 |
|
|
| 2385 |
|
Integer lastSelectedPointPosition = (int) (dataset.getXValue(selector.getLastSelectedSeries(), item));
|
| 2386 |
|
pointPositionsInCorpora.remove(lastSelectedPointPosition);
|
| 2387 |
|
pointPositionsInCorpora.add(lastSelectedPointPosition);
|
| 2388 |
|
}
|
| 2389 |
|
|
| 2390 |
|
|
| 2391 |
|
// FIXME: old version which returns only 1 point position
|
| 2392 |
|
// if(selector.getMultipleSelectedSeries().length > 0) {
|
| 2393 |
|
// int selectedSeries = selector.getMultipleSelectedSeries()[0];
|
| 2394 |
|
// if(selector.getMouseOverItemInSeries(selectedSeries) != -1) {
|
| 2395 |
|
// XYDataset dataset = ((JFreeChart) chart).getXYPlot().getDataset();
|
| 2396 |
|
// // if it's the dummy last chart point, get the previous point position instead of ther last one
|
| 2397 |
|
// if(selector.getMouseOverItemInSeries(selectedSeries) == dataset.getItemCount(selector.getMultipleSelectedSeries()[0]) - 1) {
|
| 2398 |
|
// pointPositionsInCorpora.add((int) (dataset.getXValue(selector.getMultipleSelectedSeries()[0], selector.getMouseOverItemInSeries(selectedSeries) - 1)));
|
| 2399 |
|
// }
|
| 2400 |
|
// else {
|
| 2401 |
|
// pointPositionsInCorpora.add((int) (dataset.getXValue(selector.getMultipleSelectedSeries()[0], selector.getMouseOverItemInSeries(selectedSeries))));
|
| 2402 |
|
// }
|
| 2403 |
|
//
|
| 2404 |
|
// }
|
|
1364 |
//
|
|
1365 |
//
|
|
1366 |
// @Override
|
|
1367 |
// public void updateChartCAFactorialMapSetDimensions(Object chart, CA ca, int dimension1, int dimension2) {
|
|
1368 |
// super.updateChartCAFactorialMapSetDimensions(chart, ca, dimension1, dimension2);
|
|
1369 |
//
|
|
1370 |
// // Modify data set
|
|
1371 |
// ((FCAXYDataset) ((JFreeChart) chart).getXYPlot().getDataset()).setAxis1(dimension1);
|
|
1372 |
// ((FCAXYDataset) ((JFreeChart) chart).getXYPlot().getDataset()).setAxis2(dimension2);
|
|
1373 |
//
|
|
1374 |
// // Update axis labels
|
|
1375 |
// // FIXME : create a method in CA to directly get a singular value as percent ?
|
|
1376 |
// try {
|
|
1377 |
// double sinuglarValuesSum = ca.getValeursPropresSum();
|
|
1378 |
// DecimalFormat f = new DecimalFormat("###.00"); //$NON-NLS-1$
|
|
1379 |
// ((JFreeChart) chart).getXYPlot().getDomainAxis().setLabel(ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + dimension1 + " (" + f.format(100 * ca.getValeursPropres()[dimension1 - 1] / sinuglarValuesSum) + "%)");
|
|
1380 |
// ((JFreeChart) chart).getXYPlot().getRangeAxis().setLabel(ChartsEngineMessages.ChartsEngine_CA_FACTORIAL_MAP_AXIS_LABEL_PREFIX + " " + dimension2 + " (" + f.format(100 * ca.getValeursPropres()[dimension2 - 1] / sinuglarValuesSum) + "%)");
|
|
1381 |
//
|
|
1382 |
// // Refresh data set
|
|
1383 |
// // FIXME : any way to fire a data set event rather than reassign the same data set ?
|
|
1384 |
// ((JFreeChart) chart).getXYPlot().setDataset(((JFreeChart) chart).getXYPlot().getDataset());
|
|
1385 |
// // the code below doesn't neither center the view nor update the axes ticks of the new chart, continue tests
|
|
1386 |
// //((JFreeChart) chart).setNotify(true);
|
|
1387 |
//
|
|
1388 |
//
|
|
1389 |
// // Update the limits border
|
|
1390 |
// JFCChartsEngine.createCAFactorialMapChartLimitsBorder((JFreeChart) chart);
|
|
1391 |
//
|
| 2405 |
1392 |
// }
|
| 2406 |
|
|
| 2407 |
|
return pointPositionsInCorpora;
|
| 2408 |
|
}
|
|
1393 |
// catch(StatException e) {
|
|
1394 |
// // TODO Auto-generated catch block
|
|
1395 |
// e.printStackTrace();
|
|
1396 |
// }
|
|
1397 |
// }
|
|
1398 |
//
|
|
1399 |
//
|
|
1400 |
// @Override
|
|
1401 |
// public void updateChartCAFactorialMapHighlightPoints(Object chart, boolean rows, String[] labels) {
|
|
1402 |
//
|
|
1403 |
// MultipleItemsSelector selector = (MultipleItemsSelector) ((FCAItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
|
1404 |
//
|
|
1405 |
// // Rows
|
|
1406 |
// int series = 0;
|
|
1407 |
// // Columns
|
|
1408 |
// if(!rows) {
|
|
1409 |
// series = 1;
|
|
1410 |
// }
|
|
1411 |
// selector.removeAllSelectedItems(series);
|
|
1412 |
// int[] items = ((FCAXYDataset)((JFreeChart) chart).getXYPlot().getDataset()).getLabelIndices(series, labels);
|
|
1413 |
//
|
|
1414 |
// for(int i = 0; i < items.length; i++) {
|
|
1415 |
// selector.addSelectedItem(series, items[i]);
|
|
1416 |
// }
|
|
1417 |
//
|
|
1418 |
// ((JFreeChart) chart).setNotify(true);
|
|
1419 |
// }
|
|
1420 |
//
|
| 2409 |
1421 |
|
| 2410 |
|
@Override
|
| 2411 |
|
public ArrayList<Integer> getProgressionChartSelectedPointNumbers(Object chart) {
|
| 2412 |
1422 |
|
| 2413 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((IItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2414 |
|
ArrayList<Integer> pointNumbers = new ArrayList<Integer>();
|
| 2415 |
|
XYDataset dataset = ((JFreeChart) chart).getXYPlot().getDataset();
|
| 2416 |
|
|
| 2417 |
|
for(int i = 0; i < selector.getSelectedSeriesCount(); i++) {
|
| 2418 |
|
int series = selector.getSelectedSeries()[i];
|
| 2419 |
|
int[] items = selector.getSelectedItems(series);
|
| 2420 |
|
int lastDummyItem = dataset.getItemCount(series) - 1;
|
| 2421 |
|
for(int j = 0; j < items.length; j++) {
|
| 2422 |
|
int item = items[j];
|
| 2423 |
|
// manage the first dummy point
|
| 2424 |
|
if(item == 0) {
|
| 2425 |
|
item++;
|
| 2426 |
|
}
|
| 2427 |
|
// manage the last dummy point
|
| 2428 |
|
else if(item == lastDummyItem) {
|
| 2429 |
|
item--;
|
| 2430 |
|
}
|
| 2431 |
|
|
| 2432 |
|
pointNumbers.add(item);
|
| 2433 |
|
}
|
| 2434 |
|
}
|
| 2435 |
|
|
| 2436 |
|
return pointNumbers;
|
| 2437 |
|
}
|
| 2438 |
|
|
| 2439 |
1423 |
|
| 2440 |
|
|
| 2441 |
|
@Override
|
| 2442 |
|
public ArrayList<Integer> getProgressionChartAllPointPositions(Object chart) {
|
| 2443 |
|
|
| 2444 |
|
ArrayList<Integer> pointPositionsInCorpora = new ArrayList<Integer>();
|
| 2445 |
|
XYDataset dataset = ((JFreeChart) chart).getXYPlot().getDataset();
|
| 2446 |
|
|
| 2447 |
|
for(int i = 0; i < dataset.getSeriesCount(); i++) {
|
| 2448 |
|
for(int j = 0; j < dataset.getItemCount(i) - 1; j++) { // -1 to skip the last dummy point of the step chart
|
| 2449 |
|
pointPositionsInCorpora.add((int) dataset.getXValue(i, j));
|
| 2450 |
|
}
|
| 2451 |
|
}
|
| 2452 |
|
|
| 2453 |
|
return pointPositionsInCorpora;
|
| 2454 |
|
}
|
| 2455 |
|
|
| 2456 |
|
@Override
|
| 2457 |
|
public ArrayList<Integer> getProgressionChartSelectedSeries(Object chart) {
|
| 2458 |
|
ArrayList<Integer> selectedSeries = new ArrayList<Integer>();
|
| 2459 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((IItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2460 |
|
Integer[] multipleSelectedSeries = selector.getSelectedSeries();
|
| 2461 |
|
for(int i = 0; i < multipleSelectedSeries.length; i++) {
|
| 2462 |
|
selectedSeries.add(multipleSelectedSeries[i]);
|
| 2463 |
|
}
|
| 2464 |
|
return selectedSeries;
|
| 2465 |
|
}
|
| 2466 |
|
|
| 2467 |
|
|
| 2468 |
|
@Override
|
| 2469 |
|
public int getProgressionChartLastSelectedSeries(Object chart) {
|
| 2470 |
|
return ((MultipleItemsSelector) ((IItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector()).getLastSelectedSeries();
|
| 2471 |
|
}
|
| 2472 |
|
|
| 2473 |
|
|
| 2474 |
|
|
| 2475 |
1424 |
/**
|
| 2476 |
1425 |
* Defines the theme to use for rendering charts.
|
| 2477 |
1426 |
* @param theme the theme to set
|
| ... | ... | |
| 2840 |
1789 |
// }
|
| 2841 |
1790 |
|
| 2842 |
1791 |
|
| 2843 |
|
@Override
|
| 2844 |
|
public void updateChartCAFactorialMapSetLabelItemsSelectionOrder(Object chart, String[] rowLabels, String[] colLabels) {
|
| 2845 |
|
|
| 2846 |
|
MultipleItemsSelector selector = (MultipleItemsSelector) ((FCAItemSelectionRenderer)((JFreeChart) chart).getXYPlot().getRenderer()).getItemsSelector();
|
| 2847 |
|
selector.setCyclicItemsOrder(selector.getItemsAndSeriesOrderedByLabels((FCAXYDataset)((JFreeChart) chart).getXYPlot().getDataset(), rowLabels, colLabels));
|
| 2848 |
|
}
|
| 2849 |
1792 |
|
| 2850 |
|
|
| 2851 |
|
|
| 2852 |
1793 |
|
| 2853 |
1794 |
}
|