/ - Diff - Plateforme TXM - Forge du Centre Blaise Pascal

      * @author sjacquot
+     *
      */
     public class CAPreferences extends TXMPreferences {
     public class CAPreferences extends ChartsEnginePreferences {
     	/** The Constant QUALITYDISPLAY. */
     	public static final String QUALITY_DISPLAY_FORMAT = "quality_display_format"; //$NON-NLS-1$

tmp/org.txm.ca.core/src/org/txm/ca/core/functions/CA.java (revision 1164)
133	133	this(null, lexicalTable);
134	134	}
135	135
	136	public LexicalTable getParent() {
	137	return (LexicalTable)parent;
	138	}
	139
136	140	/**
137	141	* Creates a new empty CA.
138	142	*

      * @author sjacquot
+     *
      */
     public class SpecificitiesPreferences extends TXMPreferences {
     public class SpecificitiesPreferences extends ChartsEnginePreferences {
     	/**
     	 * Maximum score.
     	 */
-...
     	 */
     	public static final String FORMAT = "format"; //$NON-NLS-1$
     	// charts
     	public static final String CHART_GROUP_BY_LINES = "chart_group_by_lines"; //$NON-NLS-1$
     	public static final String CHART_DRAW_BARS = "chart_draw_bars"; //$NON-NLS-1$

     	 * Counter used in name suffix.
     	 */
     	protected static int ahcCounter = 1;
     	/** The symbol. */
     	String symbol = null;
     	/** The CA symbol target. */
     	String target;
     	/**
     	 * The coordinates of the clusters.
     	 */
-...
     	 */
     	protected double[] inertiaGains = null;
     	protected CA ca;
     	protected LexicalTable table;
     	/**
     	 * The metric (euclidean, manhattan).
     	 */
-...
     	 */
     	@Parameter(key=AHCPreferences.COLUMNS_COMPUTING)
     	protected boolean columnsComputing;
     	/**
     	 * To display in 2D or 3D.
     	 */
     	@Parameter(key=AHCPreferences.RENDERING_2D)
     	protected boolean rendering2D;
     	/**
     	 * Instantiates a new AHC.
+    	 *
-...
     	public AHC(String parametersNodePath)	{
     		this(parametersNodePath, null);
+    	}
     	/**
     	 * Instantiates a new AHC.
+    	 *
-...
     	public AHC(CA ca)	{
     		this(null, ca);
+    	}
     	public CA getParent() {
     		return (CA) parent;
+    	}
     	/**
     	 * Instantiates a new AHC.
+    	 *
-...
     		Log.info("Computing CAH...");
     		try {
     			this.table = this.ca.getLexicalTable();
     			this.target = this.ca.getSymbol();
     			CA ca = getParent();
     			LexicalTable table = ca.getLexicalTable();
     			this.target = ca.getSymbol();
     			// reset the number of clusters to default if columns or rows computing has changed
     			if(this.hasParameterChanged(AHCPreferences.COLUMNS_COMPUTING))	{
     				this.numberOfClusters = AHCPreferences.getInstance().getInt(AHCPreferences.N_CLUSTERS);
+    			}
     			//			if(this.hasParameterChanged(AHCPreferences.COLUMNS_COMPUTING))	{
     			//				this.numberOfClusters = AHCPreferences.getInstance().getInt(AHCPreferences.N_CLUSTERS);
     			//			}
     			String colOrLine = "columns"; //$NON-NLS-1$
     			if (!this.columnsComputing) {
-...
     					", metric=\"" + this.metric + "\"" + //$NON-NLS-1$ //$NON-NLS-2$
     					", method=\"" + this.method + "\"" + //$NON-NLS-1$ //$NON-NLS-2$
     					", graph=FALSE)"); //$NON-NLS-1$
     		} catch(Exception e) {
     			Log.printStackTrace(e);
     			return false;
-...
     		this.dirty = false;
     		return true;
+    	}
     	/**
+    	 *
     	 * @param columns
-...
     	@Override
     	public boolean loadParameters() {
     //		if(this.ca == null)	{ // moved to ComputeAHC command
     //			this.ca = (CA) this.getParent();
     //			this.ca.setVisible(false); // hide the temporary CA
     //		}
     		//		if(this.ca == null)	{ // moved to ComputeAHC command
     		//			this.ca = (CA) this.getParent();
     		//			this.ca.setVisible(false); // hide the temporary CA
     		//		}
     		return true;
+    	}
-...
     	@Override
     	public boolean canCompute() {
     		return
     				this.ca != null
     				&& Arrays.binarySearch(AHC.getMethods(), this.method) >= 0
     				Arrays.binarySearch(AHC.getMethods(), this.method) >= 0
     				&& Arrays.binarySearch(AHC.getMetrics(), this.metric) >= 0
     				&& this.numberOfClusters >= 2;
+    	}
-...
     	 */
     	public int getMaxClustersCount()	{
     		int maxClustersCount = -1;
     		int maxClustersCount = 16;
     		try {
     			RWorkspace rw = RWorkspace.getRWorkspaceInstance();
     			REXP sv = rw.eval("min(length(" + symbol + "$data$clust) - 1, 16)"); //$NON-NLS-1$ //$NON-NLS-2$
     			maxClustersCount = sv.asInteger();
     		} catch(Exception e) {
     			System.out.println("Error: "+e.getLocalizedMessage());
     			Log.printStackTrace(e);
     			int n = -1;
     			if (!this.columnsComputing) {
     				n = this.getParent().getParent().getNRows() - 1; // -1 because HCPC can't make as much groups as rows
     			} else {
     				n = this.getParent().getParent().getNColumns() - 1; // -1 because HCPC can't make as much groups as cols
+    			}
     			if (n >= 0 && n < maxClustersCount) {
     				maxClustersCount = n;
+    			}
     		} catch (Exception e) {
     			// TODO Auto-generated catch block
     			e.printStackTrace();
+    		}
     		//		try {
     		//			RWorkspace rw = RWorkspace.getRWorkspaceInstance();
     		//			REXP sv = rw.eval("min(length(" + symbol + "$data$clust) - 1, 16)"); //$NON-NLS-1$ //$NON-NLS-2$
     		//			maxClustersCount = sv.asInteger();
     		//		} catch(Exception e) {
     		//			System.out.println("Error: "+e.getLocalizedMessage());
     		//			Log.printStackTrace(e);
     		//		}
     		// FIXME: FactoMineR plot.HCPC doesn't manage more than 16 clusters when tree.barplot=TRUE, therefore we can't plot a SVG with more than that, see ticket #836 then use the code below in ChartsEngine to compute
     		// the real maximum available clusters count
     		//		// CA
-...
     		return numberOfClusters;
+    	}
     	public CA getCA() {
     		return ca;
+    	}
     	public LexicalTable getLexicalTable() {
     		return table;
     		return getParent().getLexicalTable();
+    	}
     	@Override
     	public String getSimpleName() {
     		// FIXME: to define
     //		StringBuffer buffer = new StringBuffer();
     //		buffer.append(this.columnsComputing ? "cols" : "rows"); //$NON-NLS-1$
     //		buffer.append(this.method);
     //		buffer.append(this.metric);
     //		buffer.append(this.numberOfClusters);
     		//		StringBuffer buffer = new StringBuffer();
     		//		buffer.append(this.columnsComputing ? "cols" : "rows"); //$NON-NLS-1$
     		//		buffer.append(this.method);
     		//		buffer.append(this.metric);
     		//		buffer.append(this.numberOfClusters);
     		return this.getName();
+    	}
-...
+    	}
     	/**
     	 * Gets the 2D rendering state.
     	 * If false, the rendering will be done in 3D.

      * @author sjacquot
+     *
      */
     public class AHCPreferences extends TXMPreferences {
     public class AHCPreferences extends ChartsEnginePreferences {
     	/**
     	 * To display in 2D or 3D.

     	/** The minscore. */
     	@Parameter(key=CooccurrencePreferences.MIN_SCORE)
     	protected Double pScoreMinFilter;
     	protected Float pScoreMinFilter;
     	/**
     	 * The structural unit context limit.
-...
+    	}
     	public void setParameters(CQLQuery query, List<WordProperty> properties, StructuralUnit limit, int maxLeft, int minLeft, int minRight,
     			int maxRight, int minFreq, double minScore, int minCof, boolean includeXpivot, boolean buildLexicalTableWithCooccurrents) {
     			int maxRight, int minFreq, float minScore, int minCof, boolean includeXpivot, boolean buildLexicalTableWithCooccurrents) {
     		this.pQuery = query;
     		this.pProperties = properties;
-...
     			int minLeft = parameters.getInteger(CooccurrencePreferences.MIN_LEFT);
     			int maxRight = parameters.getInteger(CooccurrencePreferences.MAX_RIGHT);
     			int minRight = parameters.getInteger(CooccurrencePreferences.MIN_RIGHT);
     			double minScore = parameters.getDouble(CooccurrencePreferences.MIN_SCORE);
     			float minScore = parameters.getFloat(CooccurrencePreferences.MIN_SCORE);
     			int minCof = parameters.getInteger(CooccurrencePreferences.MIN_COUNT);
     			int minFreq = parameters.getInteger(TXMPreferences.F_MIN);
     			boolean buildLexicalTableWithCooccurrents = parameters.getBoolean(CooccurrencePreferences.PARTIAL_LEXICAL_TABLE);
-...
     	 * @param count the count
     	 * @param score the score
     	 */
     	public void setThresfold(int freq, int count, double score) {
     	public void setThresfold(int freq, int count, float score) {
     		pFminFilter = freq;
     		pFCoocFilter = count;

     	@Override
     	public void updateEditorFromChart(boolean update) {
     		AHC ahc = this.getResult();
     		// Update the maximum value of the number of clusters spinner according to the new AHC configuration
     		this.numberOfClusters.setMaximum(this.getResult().getMaxClustersCount());
     		this.numberOfClusters.setMaximum(ahc.getMaxClustersCount());
     		// Updates the current value of the number of clusters spinner
     		this.numberOfClusters.setSelection(this.getResult().getNumberOfClusters());
     		this.numberOfClusters.setSelection(ahc.getNumberOfClusters());
     		this.rowsComputing.setSelection(!this.getResult().isColumnsComputing());
     		this.rowsComputing.setSelection(!ahc.isColumnsComputing());
+    	}
+    }

     	/**
     	 * The maximum number of word property values to display.
     	 */
     	@Parameter(key=PropertiesPreferences.MAX_PROPERTIES_TO_DISPLAY)
     	@Parameter(key = PropertiesPreferences.MAX_PROPERTIES_TO_DISPLAY)
     	protected Spinner maxPropertiesToDisplay;
     	private Button nameSaveButton;
-...
     		Group editComposite = this.getTopToolbar().installGroup(PropertiesUIMessages.editor_composite_edit_properties, PropertiesUIMessages.editor_composite_edit_properties, null, null, false);
     		editComposite.setLayout(GLComposite.createDefaultLayout(3));
     		Label nameLabel = new Label(editComposite, SWT.NONE);
     		nameLabel.setText(PropertiesUIMessages.editor_label_name);
-...
+    			}
     			@Override
     			public void widgetDefaultSelected(SelectionEvent e) { }
     			public void widgetDefaultSelected(SelectionEvent e) {
+    			}
     		});
     		Label descLabel = new Label(editComposite, SWT.NONE);
     		descLabel.setText(PropertiesUIMessages.editor_label_description);
     		descriptionText = new StyledText(editComposite, SWT.BORDER|SWT.V_SCROLL);
     		descriptionText = new StyledText(editComposite, SWT.BORDER | SWT.V_SCROLL);
     		descriptionText.setLayoutData(GridDataFactory.fillDefaults().hint(400, 100).minSize(400, 100).span(1, 2).create());
     		descriptionSaveButton = new Button(editComposite, SWT.PUSH);
     		descriptionSaveButton.setText(PropertiesUIMessages.editor_button_apply);
-...
+    			}
     			@Override
     			public void widgetDefaultSelected(SelectionEvent e) { }
     			public void widgetDefaultSelected(SelectionEvent e) {
+    			}
     		});
     		// browser
-...
     		File file = this.getResult().getHTMLFile();
     		if (file.exists()) {
     			this.browser.setUrl(file.toURI().toURL().toString());
+    		}
     		else	{
     		} else {
     			Log.severe("Information HTML file doesn't exist."); //$NON-NLS-1$
+    		}
     		String n = getResult().getCorpus().getUserName();
     		if (n == null) n = getResult().getCorpus().getName();
     		if (n == null)
     			n = getResult().getCorpus().getName();
     		nameText.setText(n);
     		String d = getResult().getCorpus().getDescription();
-...
     	public void updateResultFromEditor() {
     		// nothing to do
+    	}
+    }

     // Copyright © 2007-2010 ENS de Lyon, CNRS, INRP, University of
     // Lyon 2, University of Franche-Comté, University of Nice
     // Sophia Antipolis, University of Paris 3.
     //
     //
     // The TXM platform is free software: you can redistribute it
     // and/or modify it under the terms of the GNU General Public
     // License as published by the Free Software Foundation,
     // either version 2 of the License, or (at your option) any
     // later version.
     //
     //
     // The TXM platform is distributed in the hope that it will be
     // useful, but WITHOUT ANY WARRANTY; without even the implied
     // warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     // PURPOSE. See the GNU General Public License for more
     // details.
     //
     //
     // You should have received a copy of the GNU General
     // Public License along with the TXM platform. If not, see
     // http://www.gnu.org/licenses.
     //
     //
     //
     //
     //
     //
     // $LastChangedDate: 2016-09-19 10:31:00 +0200 (Mon, 19 Sep 2016) $
     // $LastChangedRevision: 3298 $
     // $LastChangedBy: mdecorde $
     // $LastChangedBy: mdecorde $
     //
     package org.txm.properties.core.functions;
-...
     	// Base base;
     	/** The corpus. */
     	protected CQPCorpus corpus;
     	// Numbers
     	/** The T. */
     	int numberOfWords = 0; // number of word
     	/** The N properties. */
     	int NProperties = 0; // number of word properties
     	//HashMap<String, Integer> propertiesCounts = new HashMap<String, Integer>(); // properties counts
     	// HashMap<String, Integer> propertiesCounts = new HashMap<String, Integer>();
     	// // properties counts
     	/** The properties values. */
     	HashMap<String, List<String>> propertiesValues = new HashMap<String, List<String>>(); // properties values
     	/** The N structures. */
     	int NStructures = 0; // number of structures
     	/** The structures counts. */
     	HashMap<String, Integer> structuresCounts = new HashMap<String, Integer>(); // structures counts
     	/** The internal architecture. */
     	List<String> internalArchitecture = new ArrayList<String>(); // cqp structures = propertiesCounts keys but ordered
     	/** The hierarchie counts. */
     	HashMap<String, Integer> hierarchieCounts = new HashMap<String, Integer>(); // hierarchic structures counts
     	/** The internal architecture properties. */
     	HashMap<String, HashMap<String, List<String>>> internalArchitectureProperties = new HashMap<String, HashMap<String, List<String>>>(); // hierarchic structures counts
     	/** The internal architecture properties counts. */
     	HashMap<String, HashMap<String, Integer>> internalArchitecturePropertiesCounts = new HashMap<String, HashMap<String, Integer>>(); // hierarchic structures counts
     	// Annotations description
     	/** The annotations types. */
     	HashMap<String, Integer> annotationsTypes = new HashMap<String, Integer>(); // for each annotation its description
     	/** The annotations origins. */
     	HashMap<String, Integer> annotationsOrigins = new HashMap<String, Integer>(); // for each annoation its origin description
     	/** The properties. */
     	List<WordProperty> properties;
     	/** The structures. */
     	List<StructuralUnit> structures;
-...
     	 * The HTML file.
     	 */
     	protected File file;
     	/**
     	 * The maximum number of word property values to display.
     	 */
     	@Parameter(key=PropertiesPreferences.MAX_PROPERTIES_TO_DISPLAY)
     	@Parameter(key = PropertiesPreferences.MAX_PROPERTIES_TO_DISPLAY)
     	protected int pMaxPropertiesToDisplay;
     	/**
     	 * Instantiates a new corpus Properties.
+    	 *
     	 * @param corpus a MainCorpus or a SubCorpus
     	 * @param corpus
     	 *            a MainCorpus or a SubCorpus
     	 */
     	public Properties(CQPCorpus corpus) {
     		super(corpus);
-...
     		super(parametersNodePath);
+    	}
     	@Override
     	public boolean loadParameters() {
     		this.corpus = (CQPCorpus) this.parent;
     		return true;
+    	}
     	/**
     	 * Sets the maximum properties to display.
+    	 *
     	 * @param maxPropertiesToDisplay
     	 */
     	public void setParameters(int maxPropertiesToDisplay) {
-...
+    		}
     		this.dirty = true;
+    	}
     	/**
     	 * Step general infos.
     	 */
     	public void stepGeneralInfos()
+    	{
     	public void stepGeneralInfos() {
     		try {
     			properties = corpus.getProperties();
     			NProperties = properties.size();
-...
     			Log.printStackTrace(e);
     			return;
+    		}
     		try {
     			numberOfWords = corpus.getSize();// corpus.getLexicon(corpus.getProperty("id")).nbrOfToken();
     		} catch (CqiClientException e) {
     			Log.severe(PropertiesCoreMessages.Properties_6 + corpus.getName() + PropertiesCoreMessages.Properties_8);
     			Log.printStackTrace(e);
     			return;
+    		}
+    		}
+    	}
     	/**
     	 * step2.
     	 * randomly position are choose
     	 * step2. randomly position are choose
     	 */
     	public void stepLexicalProperties() {
     		propertiesValues.clear();
     		AbstractCqiClient cqiClient = CorpusManager.getCorpusManager().getCqiClient();
     		for (Property p : properties) {
     			//int size;
     			// int size;
     			try {
     				//size = CorpusManager.getCorpusManager().getCqiClient().lexiconSize(p.getQualifiedName());
     				//propertiesCounts.put(p.getName(), size);
     				//List<String> list = Arrays.asList(corpus.getLexicon(p).getForms(this.maxvalue));
     				// size =
     				// CorpusManager.getCorpusManager().getCqiClient().lexiconSize(p.getQualifiedName());
     				// propertiesCounts.put(p.getName(), size);
     				// List<String> list =
     				// Arrays.asList(corpus.getLexicon(p).getForms(this.maxvalue));
     				int[] positions = new int[Math.min(pMaxPropertiesToDisplay, numberOfWords)];
     				for(int i = 0 ; i < Math.min(pMaxPropertiesToDisplay, numberOfWords) ; i++) {
     				for (int i = 0; i < Math.min(pMaxPropertiesToDisplay, numberOfWords); i++) {
     					positions[i] = i;
+    				}
     				//ArrayList<String> values = new ArrayList<String>();
     				// ArrayList<String> values = new ArrayList<String>();
     				LinkedHashSet<String> values = new LinkedHashSet<String>(cqiClient.getSingleData(p, positions));
     				propertiesValues.put(p.getName(), new ArrayList<String>(values));
     			} catch (Exception e) {
-...
+    			}
+    		}
+    	}
     	/**
     	 * Step structural units.
     	 */
     	public void stepStructuralUnits()
+    	{
     	public void stepStructuralUnits() {
     		try {
     			structures = corpus.getOrderedStructuralUnits();
     		} catch (CqiClientException e) {
-...
     			hierarchieCounts.put(su.getName(), -1);
     			internalArchitectureProperties.put(su.getName(), new HashMap<String, List<String>>());
     			internalArchitecturePropertiesCounts.put(su.getName(), new HashMap<String, Integer>());
     			if (su.getProperties().size() > 0) {
     				for (StructuralUnitProperty sup : su.getProperties())  {// for each of its property
     				for (StructuralUnitProperty sup : su.getProperties()) {// for each of its property
     					try {
     						List<String> allvalues = sup.getValues(corpus);
     						internalArchitectureProperties.get(su.getName()).put(sup.getName(), allvalues.subList(0, Math.min(allvalues.size(), pMaxPropertiesToDisplay)));
-...
+    	}
     	// FIXME: useless?
     //	/**
     //	 * Instantiates a new diagnostic.
     //	 *
     //	 * @param partition the partition
     //	 * @throws CqiClientException the cqi client exception
     //	 */
     //	public Information(Partition partition) throws CqiClientException {
     //		corpus = partition.getCorpus();
     //		this.partition = partition;
     //		int T = corpus.getSize();
     //		System.out.println(InformationCoreMessages.Properties_12);
     //		int nbParts = partition.getNPart();
     //		List<String> partNames = partition.getPartNames();
     //		List<Integer> partSizes = new ArrayList<Integer>();
     //		List<List<Property>> partProperties = new ArrayList<List<Property>>();
     //		List<String> partQueries = new ArrayList<String>();
     //		for (Part part : partition.getParts()) {
     //			partSizes.add(part.getSize());
     //			partProperties.add(part.getProperties());
     //			partQueries.add(part.getQuery().getQueryString());
     //		}
     //	}
     	// /**
     	// * Instantiates a new diagnostic.
     	// *
     	// * @param partition the partition
     	// * @throws CqiClientException the cqi client exception
     	// */
     	// public Information(Partition partition) throws CqiClientException {
     	// corpus = partition.getCorpus();
     	// this.partition = partition;
     	// int T = corpus.getSize();
     	// System.out.println(InformationCoreMessages.Properties_12);
     	// int nbParts = partition.getNPart();
     	// List<String> partNames = partition.getPartNames();
     	// List<Integer> partSizes = new ArrayList<Integer>();
     	// List<List<Property>> partProperties = new ArrayList<List<Property>>();
     	// List<String> partQueries = new ArrayList<String>();
     	// for (Part part : partition.getParts()) {
     	// partSizes.add(part.getSize());
     	// partProperties.add(part.getProperties());
     	// partQueries.add(part.getQuery().getQueryString());
     	// }
     	// }
     	/**
     	 * dump the results of the diagnostic in a String containing HTML code.
-...
     				"<meta http-equiv=\"Content-Type\" content=\"text/html; charset=UTF-8\"/>" + //$NON-NLS-1$
     				"</head>" + //$NON-NLS-1$
     				"<body>\n"); //$NON-NLS-1$
     		buff.append("<h2 style'font-family:\"Arial\";'>"+PropertiesCoreMessages.Properties_3 + this.corpus.getName() +" (id="+this.corpus.getID()+")</h2>\n"); //$NON-NLS-2$ //$NON-NLS-1$
     		buff.append("<h2 style'font-family:\"Arial\";'>" + PropertiesCoreMessages.Properties_3 + this.corpus.getName() + " (id=" + this.corpus.getID() + ")</h2>\n"); //$NON-NLS-2$ //$NON-NLS-1$
     		if (corpus.getDescription() != null && corpus.getDescription().length() > 0) {
     			buff.append("<p>"+corpus.getDescription()+"</p>"); //$NON-NLS-1$ //$NON-NLS-2$
     			buff.append("<p>" + corpus.getDescription() + "</p>"); //$NON-NLS-1$ //$NON-NLS-2$
+    		}
     		buff.append("<h3 style'font-family:\"Arial\";'>"+PropertiesCoreMessages.Properties_5+ "</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<h3 style'font-family:\"Arial\";'>" + PropertiesCoreMessages.Properties_5 + "</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		// counts
     		buff.append("<ul>\n"); //$NON-NLS-1$
     		buff.append("<li>" + PropertiesCoreMessages.Properties_7 + numberOfWords + "</li>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<li>" + PropertiesCoreMessages.Properties_7 + numberOfWords + "</li>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<li>" + PropertiesCoreMessages.Properties_9 + (NProperties - 1) + "</li>\n"); //$NON-NLS-2$ //$NON-NLS-1$
     		buff.append("<li>" + PropertiesCoreMessages.Properties_16 + NStructures + "</li>\n"); //$NON-NLS-2$ //$NON-NLS-1$
     		buff.append("</ul>\n"); //$NON-NLS-1$
     		// Propriétés d'occurrences
     		buff.append("<h3 style'font-family:\"Arial\";'>"+NLS.bind(PropertiesCoreMessages.Properties_14, pMaxPropertiesToDisplay) + "</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<h3 style'font-family:\"Arial\";'>" + NLS.bind(PropertiesCoreMessages.Properties_14, pMaxPropertiesToDisplay) + "</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		ArrayList<String> properties = new ArrayList<String>(propertiesValues.keySet());
     		Collections.sort(properties);
     		buff.append("<ul>\n"); //$NON-NLS-1$
     		for (String s : properties) {
     			if (!s.equals("id")) //$NON-NLS-1$
+    			{
     				//buff.append("<li> " + s + " (" + propertiesCounts.get(s) + ") : "); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     				buff.append("<li> " + s + " : "); //$NON-NLS-1$ //$NON-NLS-2$
     			if (!s.equals("id")) { //$NON-NLS-1$
     				// buff.append("<li> " + s + " (" + propertiesCounts.get(s) + ") : ");
     				// //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     				buff.append("<li> " + s + " : "); //$NON-NLS-1$ //$NON-NLS-2$
     				for (String v : propertiesValues.get(s))
     					buff.append(v + ", "); //$NON-NLS-1$
     				buff.append("..."); //$NON-NLS-1$
     				buff.append("</li>\n"); //$NON-NLS-1$
     				buff.append("</li>\n"); //$NON-NLS-1$
+    			}
+    		}
     		buff.append("</ul>\n"); //$NON-NLS-1$
     		// Propriété de structures
     		buff.append("<h3 style'font-family:\"Arial\";'>"+NLS.bind(PropertiesCoreMessages.Properties_22, pMaxPropertiesToDisplay)+"</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<h3 style'font-family:\"Arial\";'>" + NLS.bind(PropertiesCoreMessages.Properties_22, pMaxPropertiesToDisplay) + "</h3>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		buff.append("<ul>\n"); //$NON-NLS-1$
     		for (String s : internalArchitecture) {
     			StringBuffer subbuffer = new StringBuffer();
     			if (s.equals("txmcorpus")) //$NON-NLS-1$
     				continue;//ignore the txmcorpus structure
     				continue;// ignore the txmcorpus structure
     			properties = new ArrayList<String>(internalArchitectureProperties.get(s).keySet());
     			subbuffer.append("<li> " + s + "\n<ul>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     			if (internalArchitectureProperties.get(s).keySet().size() == 0)
     				subbuffer.append("<li>"+PropertiesCoreMessages.Properties_26+"</li>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     				subbuffer.append("<li>" + PropertiesCoreMessages.Properties_26 + "</li>\n"); //$NON-NLS-1$ //$NON-NLS-2$
     			//System.out.println("struct: "+s+" >> "+properties);
     			// System.out.println("struct: "+s+" >> "+properties);
     			Collections.sort(properties);
     			//System.out.println("struct: "+s+" >sort> "+properties);
     			// System.out.println("struct: "+s+" >sort> "+properties);
     			int nbOfValues = 0;
     			for (String ps : properties) {
     				if (!ps.equals("project") && !ps.equals("base") ) //$NON-NLS-1$ //$NON-NLS-2$
     				if (!ps.equals("project") && !ps.equals("base")) //$NON-NLS-1$ //$NON-NLS-2$
+    				{
     					//System.out.println("struct: "+s+" >> "+ps);
     					// System.out.println("struct: "+s+" >> "+ps);
     					int valuecount = internalArchitecturePropertiesCounts.get(s).get(ps);
     					ArrayList<String> values = new ArrayList<String>(internalArchitectureProperties.get(s).get(ps));
     					subbuffer.append("<li> " + ps + " (" + valuecount + ") = "); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     					//System.out.println("VALUES: "+values);
     					// System.out.println("VALUES: "+values);
     					Collections.sort(values);
     					for (int i = 0 ; i < values.size() ; i++) {
     					for (int i = 0; i < values.size(); i++) {
     						nbOfValues++;
     						String psv = values.get(i);
     						if (psv != null && psv.length() > 0)
     							subbuffer.append(psv.replace("<", "&lt;")); //$NON-NLS-1$ //$NON-NLS-2$
     						else
     							subbuffer.append("\"\""); //$NON-NLS-1$
     						if (i == values.size() -1)
     						if (i == values.size() - 1)
     							subbuffer.append("."); //$NON-NLS-1$
     						else
     							subbuffer.append(", "); //$NON-NLS-1$
     						if (i >= pMaxPropertiesToDisplay) {
     							subbuffer.append("..."); //$NON-NLS-1$
     							break;
-...
     		buff.append("</ul>\n"); //$NON-NLS-1$
     		buff.append("</body>\n"); //$NON-NLS-1$
     		buff.append("</html>\n"); //$NON-NLS-1$
     		return buff.toString();
+    	}
     	/**
     	 * dump the result in the console.
+    	 *
     	 * @param maxvalue the maxvalue
     	 * @param maxvalue
     	 *            the maxvalue
     	 * @return the string
     	 */
     	public String dump(int maxvalue) {
     		StringBuffer buff = new StringBuffer();
     		buff.append(PropertiesCoreMessages.Properties_40);
     		buff.append(PropertiesCoreMessages.Properties_41 + String.format(Locale.FRANCE,"%,d", numberOfWords) + "\n"); //$NON-NLS-1$
     		buff.append(PropertiesCoreMessages.Properties_43 + String.format("%,d", NProperties) + "\n"); //$NON-NLS-1$
     		/*for (String s : propertiesCounts.keySet())
     			if (!s.equals("id")) //$NON-NLS-1$
     				buff.append(" - " + s + " " + propertiesCounts.get(s) + "\n"); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     				*/
     		buff.append(PropertiesCoreMessages.Properties_49 + String.format("%,d", NStructures) + "\n"); //$NON-NLS-1$
     		buff.append(PropertiesCoreMessages.Properties_41 + String.format(Locale.FRANCE, "%,d", numberOfWords) + "\n"); //$NON-NLS-1$
     		buff.append(PropertiesCoreMessages.Properties_43 + String.format("%,d", NProperties) + "\n"); //$NON-NLS-1$
     		/*
     		 * for (String s : propertiesCounts.keySet()) if (!s.equals("id")) //$NON-NLS-1$
     		 * buff.append(" - " + s + " " + propertiesCounts.get(s) + "\n"); //$NON-NLS-1$
     		 * //$NON-NLS-2$ //$NON-NLS-3$
     		 */
     		buff.append(PropertiesCoreMessages.Properties_49 + String.format("%,d", NStructures) + "\n"); //$NON-NLS-1$
     		for (String s : structuresCounts.keySet())
     			buff.append(" - " + s + "\n");//+structuresCounts.get(s)+"\n"); //$NON-NLS-1$ //$NON-NLS-2$
     			buff.append(" - " + s + "\n");// +structuresCounts.get(s)+"\n"); //$NON-NLS-1$ //$NON-NLS-2$
     		/*
     		 * buff.append("* Structural Units counts\n"); for(String s :
     		 * internalArchitecture)
     		 * buff.append(" - "+s+" "+hierarchieCounts.get(s)+"\n");
     		 * internalArchitecture) buff.append(" - "+s+" "+hierarchieCounts.get(s)+"\n");
     		 */
     		buff.append(PropertiesCoreMessages.Properties_0);
     		for (String s : internalArchitecture) {
-...
     			for (String ps : internalArchitectureProperties.get(s).keySet()) {
     				if (!(s.equals("text") && (ps.equals("project") || ps.equals("base") || ps.equals("id")))) //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$ //$NON-NLS-4$
+    				{
     					buff
     					.append("   - " + ps + "(" + internalArchitectureProperties.get(s).get(ps).size() + ") = "); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     					buff.append("   - " + ps + "(" + internalArchitectureProperties.get(s).get(ps).size() + ") = "); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
     					int valuecount = 0;
     					for (String psv : internalArchitectureProperties.get(s)
     							.get(ps)) {
     					for (String psv : internalArchitectureProperties.get(s).get(ps)) {
     						buff.append(psv);
     						if (valuecount++ >= maxvalue) {
     							buff.append("..."); //$NON-NLS-1$
     							break;
+    						}
     						if (valuecount < internalArchitectureProperties.get(s)
     								.get(ps).size())
     						if (valuecount < internalArchitectureProperties.get(s).get(ps).size())
     							buff.append(", "); //$NON-NLS-1$
+    					}
-...
     	/**
     	 * dump the diagnostic in a text file.
+    	 *
     	 * @param outfile the outfile
     	 * @param maxvalue the maxvalue
     	 * @param outfile
     	 *            the outfile
     	 * @param maxvalue
     	 *            the maxvalue
     	 * @return true, if successful
     	 */
     	public boolean toTxt(File outfile, String encoding, int maxvalue) {
-...
     	/**
     	 * dump the diagnostic in a HTML file.
+    	 *
     	 * @param outfile the outfile
     	 * @param outfile
     	 *            the outfile
     	 * @return true, if successful
     	 */
     	public boolean toHTML(File outfile) {
     		outfile.getParentFile().mkdirs();
     		PrintWriter writer;
     		try {
     			writer = IOUtils.getWriter(outfile); //$NON-NLS-1$
     			writer = IOUtils.getWriter(outfile); // $NON-NLS-1$
     			writer.write(this.htmlDump());
     			writer.close();
     		} catch (IOException e) {
-...
     	/**
     	 * dump the diagnostic in a text file, maxvalue = 100.
+    	 *
     	 * @param outfile the outfile
     	 * @param outfile
     	 *            the outfile
     	 * @return true, if successful
     	 */
     	public boolean toTxt(File outfile) {
-...
     	@Override
     	protected boolean _compute() throws Exception {
     		this.beginTask("Computing properties...", 3);
     		this.stepGeneralInfos();
     		this.worked(1);
     		this.stepLexicalProperties();
     		this.worked(1);
     		this.stepStructuralUnits();
     		this.worked(1);
     		String txmhome = Toolbox.getTxmHomePath();
     		String filename = corpus.getMainCorpus() + "-" + corpus.getName(); //$NON-NLS-1$
     		if (corpus instanceof MainCorpus) {
     			filename = corpus.getID(); //$NON-NLS-1$
     			filename = corpus.getID(); // $NON-NLS-1$
+    		}
     		filename = AsciiUtils.buildId(filename);
     		file = new File(txmhome, "results/" + filename + "-infos.html"); //$NON-NLS-1$ //$NON-NLS-2$
     		this.toHTML(file);
     		return true;
+    	}
     	/**
     	 * Gets the HTML file.
+    	 *
     	 * @return the HTML file
     	 */
     	public File getHTMLFile() {
-...
     		return true;
+    	}
     	@Override
     	public boolean saveParameters() {
     		// nothing to do -> all parameters are already managed by autoSaveParameters

      * @author sjacquot
+     *
      */
     public class PartitionDimensionsPreferences extends TXMPreferences {
     public class PartitionDimensionsPreferences extends ChartsEnginePreferences {
     	public static final String CHART_DIMENSIONS_DISPLAY_PARTS_COUNT_IN_TITLE = "chart_dimensions_display_parts_count_in_title"; //$NON-NLS-1$
     	public static final String CHART_DIMENSIONS_SORT_BY_SIZE = "chart_dimensions_sort_by_parts_size"; //$NON-NLS-1$
     	/**
     	 * Gets the instance.
     	 * @return the instance
-...
+    		}
     		return TXMPreferences.instances.get(PartitionDimensionsPreferences.class);
+    	}
     	@Override
     	public void initializeDefaultPreferences() {

     	 * @throws Exception
     	 */
     	public int getNRows() throws Exception {
     		return statsData.getNRows();
     		if (statsData != null) {
     			return statsData.getNRows();
     		} else {
     			return 0;
+    		}
+    	}
     	/**
-...
+    	}
     	public Vector getRowNames() throws Exception {
     		return statsData.getRowNames();
     		if (statsData != null) {
     			return statsData.getRowNames();
     		} else {
     			return null;
+    		}
+    	}
     	@Override

     	@Override
     	public void widgetDefaultSelected(SelectionEvent e) {
     		// TODO Auto-generated method stub
     		if((e.getSource() instanceof Spinner) || e.stateMask != 0)	{
     			this.editor.compute(true);
+    		}
+    	}
     	@Override

      * @author sjacquot
+     *
      */
     public class WordCloudPreferences extends TXMPreferences {
     public class WordCloudPreferences extends ChartsEnginePreferences {
     	public static final String PREFERENCES_PREFIX = "wordcloud_";
     	public static final String MAX_WORDS_COUNT = PREFERENCES_PREFIX + "max_words"; //$NON-NLS-1$
-...
     	public static final String ROTATION_PERCENT = PREFERENCES_PREFIX + "rotation_percent"; //$NON-NLS-1$
     	public static final String RANDOM_POSITIONS = PREFERENCES_PREFIX + "random_positions"; //$NON-NLS-1$
     	@Override
     	public void initializeDefaultPreferences() {
     		super.initializeDefaultPreferences();

     				int minf = CooccurrencePreferences.getInstance().getInt(TXMPreferences.F_MIN);
     				int mincof = CooccurrencePreferences.getInstance().getInt(CooccurrencePreferences.MIN_COUNT);
     				int minscore = (int) CooccurrencePreferences.getInstance().getDouble(CooccurrencePreferences.MIN_SCORE);
     				float minscore = CooccurrencePreferences.getInstance().getFloat(CooccurrencePreferences.MIN_SCORE);
     				boolean buildLexicalTableWithCooccurrents = CooccurrencePreferences.getInstance().getBoolean(CooccurrencePreferences.PARTIAL_LEXICAL_TABLE);
     				StructuralUnit limit = null;
-...
     				try {
     					cooc = new Cooccurrence(corpus);
     					cooc.setParameters(query, properties, limit, maxleft, minleft, minright, maxright, minf, mincof, minscore, false, buildLexicalTableWithCooccurrents);
     					cooc.setParameters(query, properties, limit, maxleft, minleft, minright, maxright, minf, minscore, mincof, false, buildLexicalTableWithCooccurrents);
+    				}
     				catch (Exception e) {
     					Log.printStackTrace(e);

      * @author sjacquot
+     *
      */
     public class ProgressionPreferences extends TXMPreferences {
     public class ProgressionPreferences extends ChartsEnginePreferences {
     	/** The Constant REPEAT_VALUES. */
     	public static final String REPEAT_SAME_VALUES = "repeat_same_values"; //$NON-NLS-1$

      * @author sjacquot
+     *
      */
     public class TextsBalancePreferences extends TXMPreferences {
     public class TextsBalancePreferences extends ChartsEnginePreferences {
     	public static final String GROUP_BY_TEXTS = "group_by_texts"; //$NON-NLS-1$

Laboratoire ICAR » Plateforme TXM

Révision 1164