root / ase / lattice / monoclinic.py @ 14
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| 1 | 1 | tkerber | """Function-like object creating monoclinic lattices.
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| 2 | 1 | tkerber |
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| 3 | 1 | tkerber | The following lattice creator is defined:
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| 4 | 1 | tkerber | SimpleMonoclinic
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| 5 | 1 | tkerber | BaseCenteredMonoclinic
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| 6 | 1 | tkerber | """
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| 7 | 1 | tkerber | |
| 8 | 1 | tkerber | from ase.lattice.triclinic import TriclinicFactory |
| 9 | 1 | tkerber | import numpy as np |
| 10 | 1 | tkerber | from ase.data import reference_states as _refstate |
| 11 | 1 | tkerber | |
| 12 | 1 | tkerber | |
| 13 | 1 | tkerber | class SimpleMonoclinicFactory(TriclinicFactory): |
| 14 | 1 | tkerber | "A factory for creating simple monoclinic lattices."
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| 15 | 1 | tkerber | # The name of the crystal structure in ChemicalElements
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| 16 | 1 | tkerber | xtal_name = "monoclinic"
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| 17 | 1 | tkerber | |
| 18 | 1 | tkerber | def make_crystal_basis(self): |
| 19 | 1 | tkerber | "Make the basis matrix for the crystal unit cell and the system unit cell."
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| 20 | 1 | tkerber | # First convert the basis specification to a triclinic one
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| 21 | 1 | tkerber | if type(self.latticeconstant) == type({}): |
| 22 | 1 | tkerber | self.latticeconstant['beta'] = 90 |
| 23 | 1 | tkerber | self.latticeconstant['gamma'] = 90 |
| 24 | 1 | tkerber | else:
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| 25 | 1 | tkerber | if len(self.latticeconstant) == 4: |
| 26 | 1 | tkerber | self.latticeconstant = self.latticeconstant + (90,90) |
| 27 | 1 | tkerber | else:
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| 28 | 1 | tkerber | raise ValueError, "Improper lattice constants for monoclinic crystal." |
| 29 | 1 | tkerber | |
| 30 | 1 | tkerber | TriclinicFactory.make_crystal_basis(self)
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| 31 | 1 | tkerber | |
| 32 | 1 | tkerber | SimpleMonoclinic = SimpleMonoclinicFactory() |
| 33 | 1 | tkerber | |
| 34 | 1 | tkerber | class BaseCenteredMonoclinicFactory(SimpleMonoclinicFactory): |
| 35 | 1 | tkerber | # The natural basis vectors of the crystal structure
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| 36 | 1 | tkerber | int_basis = np.array([[1, -1, 0], |
| 37 | 1 | tkerber | [1, 1, 0], |
| 38 | 1 | tkerber | [0, 0, 2]]) |
| 39 | 1 | tkerber | basis_factor = 0.5
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| 40 | 1 | tkerber | |
| 41 | 1 | tkerber | # Converts the natural basis back to the crystallographic basis
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| 42 | 1 | tkerber | inverse_basis = np.array([[1, 1, 0], |
| 43 | 1 | tkerber | [-1, 1, 0], |
| 44 | 1 | tkerber | [0, 0, 1]]) |
| 45 | 1 | tkerber | inverse_basis_factor = 1.0
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| 46 | 1 | tkerber | |
| 47 | 1 | tkerber | BaseCenteredMonoclinic = BaseCenteredMonoclinicFactory() |