root / src / EgradPath.f90 @ 1
Historique | Voir | Annoter | Télécharger (26,36 ko)
1 | 1 | equemene | SUBROUTINE EGradPath(Iopt,Flag_Opt_Geom) |
---|---|---|---|
2 | 1 | equemene | |
3 | 1 | equemene | ! This subroutine calculates the energy+gradient for all points of |
4 | 1 | equemene | ! the path |
5 | 1 | equemene | |
6 | 1 | equemene | use Path_module, only : ProgExe, NCoord, PROG, Nat, NGeomF, Coord, IntCoordF, & |
7 | 1 | equemene | IndZmat, XyzGeomF, Atome, Order, OrderInv, Latr, FrozAtoms, & |
8 | 1 | equemene | Grad, Energies, renum, dzdc, massat, Pi, NCART, OptReac, & |
9 | 1 | equemene | OptProd, IntCoordI, GeomOld_all, AtName, Unit |
10 | 1 | equemene | ! GeomOld_all(NGeomF,NCoord), BTransInv (3*Nat,NCoord): used for Baker case |
11 | 1 | equemene | use Io_module |
12 | 1 | equemene | |
13 | 1 | equemene | IMPLICIT NONE |
14 | 1 | equemene | |
15 | 1 | equemene | INTEGER(KINT), INTENT(IN) :: Iopt |
16 | 1 | equemene | LOGICAL, INTENT(IN) :: Flag_Opt_Geom |
17 | 1 | equemene | |
18 | 1 | equemene | INTEGER(KINT) :: IGeom,IGeom0,IGeomF |
19 | 1 | equemene | CHARACTER(LCHARS) :: Line,FileInp,RunCommand |
20 | 1 | equemene | CHARACTER(SCHARS) :: Line2 |
21 | 1 | equemene | |
22 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: GeomTmp(:),GradTmp(:) ! NCoord |
23 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: GradCart(:) ! 3*Nat |
24 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: PathCart(:,:) ! (3*Nat,NGeomF) |
25 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: x(:), y(:), z(:) |
26 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: x_k(:), y_k(:), z_k(:) |
27 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: GeomCart(:,:) !(Nat,3) |
28 | 1 | equemene | REAL(KREAL), ALLOCATABLE :: GeomOld_dummy(:),GeomCart_old_dummy(:,:) |
29 | 1 | equemene | REAL(KREAL) :: E |
30 | 1 | equemene | LOGICAL :: Debug |
31 | 1 | equemene | LOGICAL, SAVE :: First=.TRUE. |
32 | 1 | equemene | |
33 | 1 | equemene | INTEGER(KINT) :: I, Iat, IBeg, Idx |
34 | 1 | equemene | REAL(KREAL) :: RTmp1, RTmp2, RTmp3 |
35 | 1 | equemene | INTEGER(KINT) :: Itmp1, ITmp2 |
36 | 1 | equemene | |
37 | 1 | equemene | INTERFACE |
38 | 1 | equemene | function valid(string) result (isValid) |
39 | 1 | equemene | CHARACTER(*), intent(in) :: string |
40 | 1 | equemene | logical :: isValid |
41 | 1 | equemene | END function VALID |
42 | 1 | equemene | END INTERFACE |
43 | 1 | equemene | |
44 | 1 | equemene | debug=valid('EGradPath') |
45 | 1 | equemene | |
46 | 1 | equemene | if (debug) Call header("Entering EgradPath") |
47 | 1 | equemene | |
48 | 1 | equemene | ALLOCATE(GeomTmp(NCoord)) |
49 | 1 | equemene | ALLOCATE(x(Nat),y(Nat),z(Nat)) |
50 | 1 | equemene | ALLOCATE(x_k(Nat),y_k(Nat),z_k(Nat)) |
51 | 1 | equemene | ALLOCATE(GeomOld_dummy(NCoord)) |
52 | 1 | equemene | ALLOCATE(GeomCart_old_dummy(Nat,3)) |
53 | 1 | equemene | |
54 | 1 | equemene | |
55 | 1 | equemene | IF (RunMode=="PARA") THEN ! matches at L315 |
56 | 1 | equemene | |
57 | 1 | equemene | ALLOCATE(GradCart(3*Nat),PathCart(3*Nat,NGeomF)) |
58 | 1 | equemene | |
59 | 1 | equemene | |
60 | 1 | equemene | SELECT CASE(Prog) |
61 | 1 | equemene | CASE ("VASP") |
62 | 1 | equemene | ! We will use the NEB routine of VASP to get all forces at once on Para8 queue |
63 | 1 | equemene | |
64 | 1 | equemene | ! First, we create all the POSCAR into the 0x directories |
65 | 1 | equemene | |
66 | 1 | equemene | ! With RunMode="Para" one cannot optimize reactants or products (due to Vasp constraints) |
67 | 1 | equemene | ! so this has been done beforehand :-) |
68 | 1 | equemene | IGeom0=2 |
69 | 1 | equemene | IGeomF=NGeomF-1 |
70 | 1 | equemene | PathCart=0.d0 |
71 | 1 | equemene | |
72 | 1 | equemene | IF (First) THEN |
73 | 1 | equemene | ! For the first iteration, we do write a POSCAR into 00 and 0Final |
74 | 1 | equemene | ! Vasp needs it ! |
75 | 1 | equemene | First=.FALSE. |
76 | 1 | equemene | IGeom0=1 |
77 | 1 | equemene | IGeomF=NGeomF |
78 | 1 | equemene | END IF |
79 | 1 | equemene | |
80 | 1 | equemene | Line2="00" |
81 | 1 | equemene | DO IGeom=IGeom0,IGeomF |
82 | 1 | equemene | |
83 | 1 | equemene | ! NOTE THAT HERE IGeom0 (IGeomF) IS NOT 1 (NGeomF) FOR NON-FIRST OPTIMIZATION. |
84 | 1 | equemene | ! THIS WILL HAVE EFFECT ON XyzGeomF UPDATE IN BAKER CASE. |
85 | 1 | equemene | WRITE(Line,'(I5)') IGeom-1 |
86 | 1 | equemene | Idx=2-Len_TRIM(ADJUSTL(Line)) |
87 | 1 | equemene | FileInp=Line2(1:Idx) // TRIM(AdjustL(Line)) // "/POSCAR" |
88 | 1 | equemene | if (debug) WRITE(*,*) "Creating ",TRIM(FileInp) |
89 | 1 | equemene | OPEN(IOTMP,File=TRIM(FileInp)) |
90 | 1 | equemene | |
91 | 1 | equemene | WRITE(Line,"('Geometry ',I3,'/',I3,' for iteration ',I3)") Igeom,NgeomF,Iopt |
92 | 1 | equemene | if (debug) WRITE(*,*) Line |
93 | 1 | equemene | SELECT CASE(Coord) |
94 | 1 | equemene | CASE ('ZMAT') |
95 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
96 | 1 | equemene | Call Int2cart(nat,indzmat,geomTmp,PathCart(1,IGeom)) |
97 | 1 | equemene | CASE ('BAKER') |
98 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
99 | 1 | equemene | ! |
100 | 1 | equemene | IF (IOpt .EQ. 0) THEN |
101 | 1 | equemene | ! EgradPath(...) is called only after the call of PathCreate(...) |
102 | 1 | equemene | ! and in PathCreate, IF (MOD(IOpt,IReparam).EQ.0) (which is always |
103 | 1 | equemene | ! true if IOpt==0), THEN ExtraPol_baker(...) is called. |
104 | 1 | equemene | ! In ExtraPol_baker(...), XyzGeomF(...) is calculated upon converting |
105 | 1 | equemene | ! the interpolated internal coordinates into cartesian coordinates. |
106 | 1 | equemene | ! Thus here we don't need to reconvert the internal coordinates again |
107 | 1 | equemene | ! to the cartesian coordinates. |
108 | 1 | equemene | DO I=1,Nat |
109 | 1 | equemene | PathCart(3*I-2,IGeom) = XyzGeomF(IGeom,1,I) |
110 | 1 | equemene | PathCart(3*I-1,IGeom) = XyzGeomF(IGeom,2,I) |
111 | 1 | equemene | PathCart(3*I,IGeom) = XyzGeomF(IGeom,3,I) |
112 | 1 | equemene | END DO |
113 | 1 | equemene | ELSE |
114 | 1 | equemene | ! XyzGeomF(NGeomF,3,Nat). |
115 | 1 | equemene | x_k(:) = XyzGeomF(IGeom,1,:) |
116 | 1 | equemene | y_k(:) = XyzGeomF(IGeom,2,:) |
117 | 1 | equemene | z_k(:) = XyzGeomF(IGeom,3,:) |
118 | 1 | equemene | |
119 | 1 | equemene | !Call ConvertBakerInternal_cart(GeomOld_all(IGeom,:),IntCoordI(IGeom,:), & |
120 | 1 | equemene | ! x_k,y_k,z_k,x,y,z) |
121 | 1 | equemene | ! PathCart(3*Nat,NGeomF) |
122 | 1 | equemene | DO I=1,Nat |
123 | 1 | equemene | PathCart(3*I-2,IGeom) = x(I) |
124 | 1 | equemene | PathCart(3*I-1,IGeom) = y(I) |
125 | 1 | equemene | PathCart(3*I,IGeom) = z(I) |
126 | 1 | equemene | END DO |
127 | 1 | equemene | |
128 | 1 | equemene | XyzGeomF(IGeom,1,:)=x(:) |
129 | 1 | equemene | XyzGeomF(IGeom,2,:)=y(:) |
130 | 1 | equemene | XyzGeomF(IGeom,3,:)=z(:) |
131 | 1 | equemene | END IF |
132 | 1 | equemene | CASE ('MIXED') |
133 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
134 | 1 | equemene | Call Mixed2cart(nat,indzmat,geomTmp,PathCart(1,IGeom)) |
135 | 1 | equemene | CASE ('CART','HYBRID') |
136 | 1 | equemene | !!! CAUTION : PFL 29.AUG.2008 -> |
137 | 1 | equemene | ! XyzGeomI/F stored in (NGeomI/F,3,Nat) and NOT (NGeomI/F,Nat,3) |
138 | 1 | equemene | ! This should be made consistent !!!!!!!!!!!!!!! |
139 | 1 | equemene | GeomTmp=Reshape(reshape(XyzGeomF(IGeom,:,:),(/Nat,3/),ORDER=(/2,1/)),(/3*Nat/)) |
140 | 1 | equemene | !!! <- CAUTION : PFL 29.AUG.2008 |
141 | 1 | equemene | PathCart(:,IGeom)=GeomTmp |
142 | 1 | equemene | CASE DEFAULT |
143 | 1 | equemene | WRITE(*,*) "Coord=",TRIM(Coord)," not recognized. EgradPath L134. STOP" |
144 | 1 | equemene | STOP |
145 | 1 | equemene | END SELECT |
146 | 1 | equemene | |
147 | 1 | equemene | IF (debug) THEN |
148 | 1 | equemene | WRITE(*,*) "Calling PrintGeomVasp for geom",Igeom |
149 | 1 | equemene | Call PrintGeom(Line,Nat,NCoord,PathCart(1,Igeom),Coord,IoOut,Atome,Order,OrderInv,IndZmat) |
150 | 1 | equemene | END IF |
151 | 1 | equemene | Call PrintGeomVasp(Line,PathCart(1,IGeom),Latr,FrozAtoms,IoTmp) |
152 | 1 | equemene | |
153 | 1 | equemene | ! IF (debug) THEN |
154 | 1 | equemene | ! WRITE(*,*) 'DBG MAin, COORD=',TRIM(COORD), ' Igeom=',IGeom |
155 | 1 | equemene | ! WRITE(*,'(3(1X,F9.4))') Reshape(Reshape(XyzGeomF(IGeom,:,:),(/Nat,3/),ORDER=(/2,1/)),(/3*Nat/)) |
156 | 1 | equemene | ! WRITE(*,'(3(1X,F9.4))') Reshape(XyzGeomF(IGeom,:,:),(/3*Nat/)) |
157 | 1 | equemene | ! DO Iat=1,Nat |
158 | 1 | equemene | ! WRITE(*,*) XyzGeomF(IGeom,1:3,Iat) |
159 | 1 | equemene | ! END DO |
160 | 1 | equemene | ! END IF |
161 | 1 | equemene | |
162 | 1 | equemene | IF (debug) THEN |
163 | 1 | equemene | WRITE(*,*) 'DBG MAin, COORD=',TRIM(COORD),' Igeom=',IGeom,' Iopt=',Iopt |
164 | 1 | equemene | WRITE(*,*) GeomTmp(1:min(NCoord,9)) |
165 | 1 | equemene | END IF |
166 | 1 | equemene | |
167 | 1 | equemene | CLOSE(IOTMP) |
168 | 1 | equemene | END DO ! matches DO IGeom=IGeom0,IGeomF |
169 | 1 | equemene | |
170 | 1 | equemene | !!!!!!!!!!!!!!!!!!! |
171 | 1 | equemene | ! |
172 | 1 | equemene | ! We calculate the energies and gradients |
173 | 1 | equemene | ! |
174 | 1 | equemene | |
175 | 1 | equemene | RunCommand=Trim(ProgExe) |
176 | 1 | equemene | if (debug) WRITE(*,*) "Launching:", TRIM(RunCommand) |
177 | 1 | equemene | call system(RunCommand) |
178 | 1 | equemene | if (debug) WRITE(*,*) "Back from:", TRIM(RunCommand) |
179 | 1 | equemene | |
180 | 1 | equemene | !!!!!!!!!!!!! |
181 | 1 | equemene | ! |
182 | 1 | equemene | ! We read the gradients and energies |
183 | 1 | equemene | ! |
184 | 1 | equemene | IGeom0=2 |
185 | 1 | equemene | IGeomF=NGeomF-1 |
186 | 1 | equemene | Grad=0.d0 |
187 | 1 | equemene | |
188 | 1 | equemene | Line2="00" |
189 | 1 | equemene | DO IGeom=IGeom0,IGeomF |
190 | 1 | equemene | WRITE(Line,'(I5)') IGeom-1 |
191 | 1 | equemene | Idx=2-Len_TRIM(ADJUSTL(Line)) |
192 | 1 | equemene | FileInp=Line2(1:Idx) // TRIM(AdjustL(Line)) // "/OUTCAR" |
193 | 1 | equemene | if (debug) WRITE(*,*) "Reading E and forces from ", TRIM(FileInp) |
194 | 1 | equemene | OPEN(IOTMP,File=TRIM(FileInp)) |
195 | 1 | equemene | |
196 | 1 | equemene | ! We first search for the forces |
197 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
198 | 1 | equemene | ! We search for the last part of the OUTCAR file, after wavefunction is converged |
199 | 1 | equemene | DO WHILE (INDEX(LINE,'EDIFF is reached')==0) |
200 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
201 | 1 | equemene | END DO |
202 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
203 | 1 | equemene | DO WHILE (INDEX(LINE,'TOTEN')==0) |
204 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
205 | 1 | equemene | END DO |
206 | 1 | equemene | Line=Line(26:) |
207 | 1 | equemene | READ(LINE,*) E |
208 | 1 | equemene | if (debug) WRITE(*,'(1X,A,I5,A,F20.6)') "DBG Egrad_VASP E(",Igeom,")=",E |
209 | 1 | equemene | Energies(Igeom)=E |
210 | 1 | equemene | |
211 | 1 | equemene | ! We search for the forces |
212 | 1 | equemene | DO WHILE (INDEX(LINE,'TOTAL-FORCE')==0) |
213 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
214 | 1 | equemene | END DO |
215 | 1 | equemene | READ(IOTMP,'(A)',END=999,ERR=999) LINE |
216 | 1 | equemene | DO I=1,Nat |
217 | 1 | equemene | Iat=I |
218 | 1 | equemene | IF (renum) Iat=Order(I) |
219 | 1 | equemene | READ(IOTMP,*,END=999,ERR=999) Rtmp1,RTmp2,RTmp3,GradCart(3*Iat-2:3*Iat) |
220 | 1 | equemene | END DO |
221 | 1 | equemene | |
222 | 1 | equemene | Close(IoTmp) |
223 | 1 | equemene | |
224 | 1 | equemene | IF (debug) THEN |
225 | 1 | equemene | WRITE(*,*) "DBG EGRAD_VASP - GradCart=FORCES - original order" |
226 | 1 | equemene | DO I=1,Nat |
227 | 1 | equemene | Iat=Order(I) |
228 | 1 | equemene | WRITE(*,'(1X,I5,3(1X,F20.6))') I,GradCart(3*Iat-2:3*Iat) |
229 | 1 | equemene | END DO |
230 | 1 | equemene | WRITE(*,*) "DBG EGRAD_VASP - GradCart=FORCES - internal order" |
231 | 1 | equemene | DO I=1,Nat |
232 | 1 | equemene | Iat=Order(I) |
233 | 1 | equemene | WRITE(*,'(3(1X,I5),3(1X,F20.6))') I,Iat,OrderInv(I),GradCart(3*I-2:3*I) |
234 | 1 | equemene | END DO |
235 | 1 | equemene | END IF |
236 | 1 | equemene | |
237 | 1 | equemene | ! VASP gives the Forces in eV/Angstrom, so we convert it into the |
238 | 1 | equemene | ! gradient in ua/Angstrom |
239 | 1 | equemene | GradCart=-1.0d0*ev2Au*GradCart |
240 | 1 | equemene | |
241 | 1 | equemene | ! We convert it into the right coordinate system |
242 | 1 | equemene | ! This should be put into a subroutine (because it is also in egradient) |
243 | 1 | equemene | SELECT CASE (COORD) |
244 | 1 | equemene | CASE ("ZMAT") |
245 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
246 | 1 | equemene | if (debug) WRITE(*,*) "DBG EGRAD Calling CalcBMat_int" |
247 | 1 | equemene | CALL CalcBmat_int(nat, PathCart(1:3*Nat,Igeom), indzmat, dzdc, massat,atome) |
248 | 1 | equemene | CALL ConvGrad_Cart2Int(Nat,dzdc,IndZmat,GradCart,GradTmp) |
249 | 1 | equemene | |
250 | 1 | equemene | Grad(IGeom,1)=GradTmp(4) |
251 | 1 | equemene | Grad(IGeom,2)=GradTmp(7) |
252 | 1 | equemene | ! We might have troubles whith angles that are not in the [0:pi] range because, |
253 | 1 | equemene | ! when converted to catesian coord, they do appear in the [0:Pi] range to gaussian... |
254 | 1 | equemene | ! so that the derivative is not good, and a multiplicative factor should be added... |
255 | 1 | equemene | ! |
256 | 1 | equemene | ! This in fact should be taken care of in calc Bmat ... |
257 | 1 | equemene | ! |
258 | 1 | equemene | IF ((IntCoordF(Igeom,3).LE.0).OR.(IntCoordF(Igeom,3).GE.Pi)) THEN |
259 | 1 | equemene | Grad(IGeom,3)=-1.0d0*GradTmp(8) |
260 | 1 | equemene | ELSE |
261 | 1 | equemene | Grad(IGeom,3)=GradTmp(8) |
262 | 1 | equemene | END IF |
263 | 1 | equemene | Idx=4 |
264 | 1 | equemene | DO I=4,Nat |
265 | 1 | equemene | Grad(IGeom,Idx)=GradTmp(3*i-2) |
266 | 1 | equemene | Grad(IGeom,Idx+1)=GradTmp(3*i-1) |
267 | 1 | equemene | Grad(IGeom,Idx+2)=GradTmp(3*i) |
268 | 1 | equemene | Idx=Idx+3 |
269 | 1 | equemene | END DO |
270 | 1 | equemene | DEALLOCATE(GradTmp) |
271 | 1 | equemene | ! We have the gradient in Cartesian coordinates... which is ok for COORD=Cart, Hybrid |
272 | 1 | equemene | ! but we have to convert it into internal coordinates if COORD=Baker |
273 | 1 | equemene | CASE ('BAKER') |
274 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
275 | 1 | equemene | GradTmp=0.d0 |
276 | 1 | equemene | ! Below is to be corrected. |
277 | 1 | equemene | ! This is inside 'IF ((PROG=="VASP").AND.(RunMode=="PARA")) THEN' |
278 | 1 | equemene | !DO I=1, 3*Nat |
279 | 1 | equemene | ! here GradTmp and Grad are gradients in Baker coordinates |
280 | 1 | equemene | ! Not implemented IF ((PROG=="VASP").AND.(RunMode=="PARA")) |
281 | 1 | equemene | ! GradTmp(:) = GradTmp(:) + BTransInv(:,I)*GradCart(I) |
282 | 1 | equemene | !END DO |
283 | 1 | equemene | Grad(IGeom,:) = GradTmp |
284 | 1 | equemene | DEALLOCATE(GradTmp) |
285 | 1 | equemene | CASE ('MIXED') |
286 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
287 | 1 | equemene | if (debug) WRITE(*,*) "DBG EGRAD Calling CalcBMat_mixed" |
288 | 1 | equemene | CALL CalcBMat_mixed (nat,PathCart(1:3*Nat,IGeom), indzmat, dzdc, massat,atome) |
289 | 1 | equemene | CALL ConvGrad_Cart2Int(Nat,dzdc,IndZmat,GradCart,GradTmp) |
290 | 1 | equemene | DO I=1,Nat |
291 | 1 | equemene | WRITE(*,'(1X,3(1X,F10.5))') GradTmp(3*I-2:3*I) |
292 | 1 | equemene | END DO |
293 | 1 | equemene | SELECT CASE (NCART) |
294 | 1 | equemene | CASE (1) |
295 | 1 | equemene | Grad(IGeom,1:3)=GradTmp(1:3) |
296 | 1 | equemene | Grad(IGeom,4)=GradTmp(4) |
297 | 1 | equemene | Grad(IGeom,5)=GradTmp(7) |
298 | 1 | equemene | Grad(IGeom,6)=GradTmp(8) |
299 | 1 | equemene | Idx=7 |
300 | 1 | equemene | IBeg=4 |
301 | 1 | equemene | CASE(2) |
302 | 1 | equemene | Grad(IGeom,1:3)=GradTmp(1:3) |
303 | 1 | equemene | Grad(IGeom,4:6)=GradTmp(4:6) |
304 | 1 | equemene | Grad(IGeom,7)=GradTmp(7) |
305 | 1 | equemene | Grad(IGeom,8)=GradTmp(8) |
306 | 1 | equemene | Idx=9 |
307 | 1 | equemene | IBeg=4 |
308 | 1 | equemene | CASE DEFAULT |
309 | 1 | equemene | Idx=1 |
310 | 1 | equemene | IBeg=1 |
311 | 1 | equemene | END SELECT |
312 | 1 | equemene | DO I=IBeg,Nat |
313 | 1 | equemene | Grad(IGeom,Idx)=GradTmp(3*i-2) |
314 | 1 | equemene | Grad(IGeom,Idx+1)=GradTmp(3*i-1) |
315 | 1 | equemene | Grad(IGeom,Idx+2)=GradTmp(3*i) |
316 | 1 | equemene | Idx=Idx+3 |
317 | 1 | equemene | END DO |
318 | 1 | equemene | DEALLOCATE(GradTmp) |
319 | 1 | equemene | CASE ("CART","HYBRID") |
320 | 1 | equemene | Grad(IGeom,:)=GradCart |
321 | 1 | equemene | CASE DEFAULT |
322 | 1 | equemene | WRITE(*,*) "Coord=",AdjustL(Trim(COORD))," not yet implemented in EgradPath.L257.STOP" |
323 | 1 | equemene | STOP |
324 | 1 | equemene | END SELECT |
325 | 1 | equemene | |
326 | 1 | equemene | IF (debug) THEN |
327 | 1 | equemene | Line='DBG Path, GradTmp' |
328 | 1 | equemene | Call PrintGeom(Line,Nat,NCoord,reshape(GRad(Igeom,1:NCoord),(/Ncoord/)),Coord,6,Atome,Order,OrderInv,IndZmat) |
329 | 1 | equemene | END IF |
330 | 1 | equemene | END DO ! matches DO IGeom=IGeom0,IGeomF |
331 | 1 | equemene | |
332 | 1 | equemene | CASE ("GAUSSIAN") |
333 | 1 | equemene | ! We create the output files. |
334 | 1 | equemene | IGeom0=2 |
335 | 1 | equemene | IGeomF=NGeomF-1 |
336 | 1 | equemene | PathCart=0.d0 |
337 | 1 | equemene | |
338 | 1 | equemene | If (OptReac) IGeom0=1 |
339 | 1 | equemene | If (OptProd) IGeomF=NGeomF |
340 | 1 | equemene | |
341 | 1 | equemene | OPEN(IOTMP2,File="ListJob",STATUS="REPLACE") |
342 | 1 | equemene | |
343 | 1 | equemene | DO Igeom=IGeom0,IGeomF |
344 | 1 | equemene | ! We first convert the geometry into a Cartesian one |
345 | 1 | equemene | SELECT CASE(Coord) |
346 | 1 | equemene | CASE ('ZMAT') |
347 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
348 | 1 | equemene | Call Int2cart(nat,indzmat,geomTmp,PathCart(1,IGeom)) |
349 | 1 | equemene | CASE ('BAKER') |
350 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
351 | 1 | equemene | ! |
352 | 1 | equemene | IF (IOpt .EQ. 0) THEN |
353 | 1 | equemene | ! EgradPath(...) is called only after the call of PathCreate(...) |
354 | 1 | equemene | ! and in PathCreate, IF (MOD(IOpt,IReparam).EQ.0) (which is always |
355 | 1 | equemene | ! true if IOpt==0), THEN ExtraPol_baker(...) is called. |
356 | 1 | equemene | ! In ExtraPol_baker(...), XyzGeomF(...) is calculated upon converting |
357 | 1 | equemene | ! the interpolated internal coordinates into cartesian coordinates. |
358 | 1 | equemene | ! Thus here we don't need to reconvert the internal coordinates again |
359 | 1 | equemene | ! to the cartesian coordinates. |
360 | 1 | equemene | DO I=1,Nat |
361 | 1 | equemene | PathCart(3*I-2,IGeom) = XyzGeomF(IGeom,1,I) |
362 | 1 | equemene | PathCart(3*I-1,IGeom) = XyzGeomF(IGeom,2,I) |
363 | 1 | equemene | PathCart(3*I,IGeom) = XyzGeomF(IGeom,3,I) |
364 | 1 | equemene | END DO |
365 | 1 | equemene | ELSE |
366 | 1 | equemene | |
367 | 1 | equemene | ! XyzGeomF(NGeomF,3,Nat). |
368 | 1 | equemene | x_k(:) = XyzGeomF(IGeom,1,:) |
369 | 1 | equemene | y_k(:) = XyzGeomF(IGeom,2,:) |
370 | 1 | equemene | z_k(:) = XyzGeomF(IGeom,3,:) |
371 | 1 | equemene | |
372 | 1 | equemene | !Call ConvertBakerInternal_cart(GeomOld_all(IGeom,:),IntCoordI(IGeom,:), & |
373 | 1 | equemene | ! x_k,y_k,z_k,x,y,z) |
374 | 1 | equemene | ! PathCart(3*Nat,NGeomF) |
375 | 1 | equemene | DO I=1,Nat |
376 | 1 | equemene | PathCart(3*I-2,IGeom) = x(I) |
377 | 1 | equemene | PathCart(3*I-1,IGeom) = y(I) |
378 | 1 | equemene | PathCart(3*I,IGeom) = z(I) |
379 | 1 | equemene | END DO |
380 | 1 | equemene | |
381 | 1 | equemene | XyzGeomF(IGeom,1,:)=x(:) |
382 | 1 | equemene | XyzGeomF(IGeom,2,:)=y(:) |
383 | 1 | equemene | XyzGeomF(IGeom,3,:)=z(:) |
384 | 1 | equemene | END IF |
385 | 1 | equemene | CASE ('MIXED') |
386 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
387 | 1 | equemene | Call Mixed2cart(nat,indzmat,geomTmp,PathCart(1,IGeom)) |
388 | 1 | equemene | CASE ('CART','HYBRID') |
389 | 1 | equemene | !!! CAUTION : PFL 29.AUG.2008 -> |
390 | 1 | equemene | ! XyzGeomI/F stored in (NGeomI/F,3,Nat) and NOT (NGeomI/F,Nat,3) |
391 | 1 | equemene | ! This should be made consistent !!!!!!!!!!!!!!! |
392 | 1 | equemene | GeomTmp=Reshape(reshape(XyzGeomF(IGeom,:,:),(/Nat,3/),ORDER=(/2,1/)),(/3*Nat/)) |
393 | 1 | equemene | !!! <- CAUTION : PFL 29.AUG.2008 |
394 | 1 | equemene | PathCart(:,IGeom)=GeomTmp |
395 | 1 | equemene | CASE DEFAULT |
396 | 1 | equemene | WRITE(*,*) "Coord=",TRIM(Coord)," not recognized. EgradPath L75.STOP" |
397 | 1 | equemene | STOP |
398 | 1 | equemene | END SELECT |
399 | 1 | equemene | |
400 | 1 | equemene | WRITE(Line,'(I5)') IGeom |
401 | 1 | equemene | FileInp="PathPar_" // TRIM(ADJUSTL(Line)) // ".com" |
402 | 1 | equemene | WRITE(IOTMP2,'(1X,A)') TRIM(FileInp) |
403 | 1 | equemene | |
404 | 1 | equemene | OPEN(IOTMP,File=TRIM(FileInp)) |
405 | 1 | equemene | Current => Gauss_root |
406 | 1 | equemene | DO WHILE (ASSOCIATED(Current%next)) |
407 | 1 | equemene | WRITE(IOTMP,'(1X,A)') Trim(current%line) |
408 | 1 | equemene | WRITE(*,'(1X,A)') Trim(current%line) |
409 | 1 | equemene | Current => current%next |
410 | 1 | equemene | END DO |
411 | 1 | equemene | |
412 | 1 | equemene | WRITE(IOTMP,*) |
413 | 1 | equemene | |
414 | 1 | equemene | Current => Gauss_comment |
415 | 1 | equemene | DO WHILE (ASSOCIATED(Current%next)) |
416 | 1 | equemene | WRITE(IOTMP,'(1X,A)') Trim(current%line) |
417 | 1 | equemene | Current => current%next |
418 | 1 | equemene | END DO |
419 | 1 | equemene | ! WRITE(IOOUT,"('Geometry ',I3,'/',I3,' for iteration ',I3)"),Igeom,NgeomF,Iopt |
420 | 1 | equemene | |
421 | 1 | equemene | WRITE(IOTMP,*) |
422 | 1 | equemene | WRITE(IOTMP,*) Trim(Gauss_charge) |
423 | 1 | equemene | |
424 | 1 | equemene | DO I=1,Nat |
425 | 1 | equemene | If (renum) THEN |
426 | 1 | equemene | Iat=Order(I) |
427 | 1 | equemene | WRITE(IOTMP,'(1X,A10,3(1X,F15.8),A)') Trim(AtName(I)) & |
428 | 1 | equemene | ,PathCart(Iat,IGeom),PathCart(Iat+Nat,IGeom),PathCart(Iat+2*Nat,IGeom) & |
429 | 1 | equemene | ,TRIM(Gauss_Paste(I)) |
430 | 1 | equemene | ELSE |
431 | 1 | equemene | Iat=OrderInv(I) |
432 | 1 | equemene | WRITE(IOTMP,'(1X,A10,3(1X,F15.8),A)') Trim(AtName(Iat)) & |
433 | 1 | equemene | ,PathCart(Iat,IGeom),PathCart(Iat+Nat,IGeom),PathCart(Iat+2*Nat,IGeom) & |
434 | 1 | equemene | , TRIM(Gauss_Paste(Iat)) |
435 | 1 | equemene | END IF |
436 | 1 | equemene | END DO |
437 | 1 | equemene | |
438 | 1 | equemene | WRITE(IOTMP,*) |
439 | 1 | equemene | |
440 | 1 | equemene | Current => Gauss_End |
441 | 1 | equemene | DO WHILE (ASSOCIATED(Current%next)) |
442 | 1 | equemene | WRITE(IOTMP,'(1X,A)') Trim(current%line) |
443 | 1 | equemene | Current => current%next |
444 | 1 | equemene | END DO |
445 | 1 | equemene | |
446 | 1 | equemene | WRITE(IOTMP,*) |
447 | 1 | equemene | CLOSE(IOTMP) |
448 | 1 | equemene | |
449 | 1 | equemene | END DO |
450 | 1 | equemene | |
451 | 1 | equemene | Close(IOTMP2) |
452 | 1 | equemene | |
453 | 1 | equemene | ! We launch the parallel calculations |
454 | 1 | equemene | |
455 | 1 | equemene | Line=Trim(ProgExe) |
456 | 1 | equemene | IF (DEBUG) WRITE(*,*)'RunCommand:',TRIM(Line) |
457 | 1 | equemene | call system(Line) |
458 | 1 | equemene | IF (DEBUG) WRITE(*,*)'Back from RunCommand:' |
459 | 1 | equemene | |
460 | 1 | equemene | ! We read energies and gradients from the log files |
461 | 1 | equemene | |
462 | 1 | equemene | DO IGeom=IGeom0,IGeomF |
463 | 1 | equemene | WRITE(Line,'(I5)') IGeom |
464 | 1 | equemene | FileInp="PathPar_" // TRIM(ADJUSTL(Line)) // ".log" |
465 | 1 | equemene | OPEN(IOTMP,File=TRIM(FileInp)) |
466 | 1 | equemene | |
467 | 1 | equemene | ! We first search for the forces |
468 | 1 | equemene | READ(IOTMP,'(A)') LINE |
469 | 1 | equemene | DO WHILE (INDEX(LINE,'Forces (Hartrees/Bohr)')==0) |
470 | 1 | equemene | ! here, we have a problem, because there are so many ways to write E for Gaussian :-) |
471 | 1 | equemene | ! but we do not really need E except if we want to weight the different points |
472 | 1 | equemene | ! on the path... that will be done later :-) |
473 | 1 | equemene | ! And I should use ConvGaussXmol ... |
474 | 1 | equemene | ! PFL 3rd Jan 2008 -> |
475 | 1 | equemene | ! I have finally upgraded the energy reading phase so that it should be able to read |
476 | 1 | equemene | ! many formats corresponding to HF, DFT, MP2, AM1, PM3, ONIOM with or w/o PCM |
477 | 1 | equemene | ! |
478 | 1 | equemene | |
479 | 1 | equemene | ! For MP2, energy is after the last = |
480 | 1 | equemene | IF ((Line(2:9)=="E2 = ")) THEN |
481 | 1 | equemene | Itmp1=Index(LINE,"=",BACK=.TRUE.)+1 |
482 | 1 | equemene | READ(LINE(Itmp1:),*) e |
483 | 1 | equemene | END IF |
484 | 1 | equemene | ! For other methods, it is after the first = |
485 | 1 | equemene | IF ((LINE(2:9)=='Energy= ').OR.(Line(2:9)=="SCF Done").OR.(Line(2:9)=="ONIOM: e") & |
486 | 1 | equemene | .OR.(Line(2:9)==" with al") & |
487 | 1 | equemene | .OR.(Line(2:31)=="Counterpoise: corrected energy")) THEN |
488 | 1 | equemene | Itmp1=Index(LINE,"=")+1 |
489 | 1 | equemene | READ(LINE(Itmp1:),*) e |
490 | 1 | equemene | END IF |
491 | 1 | equemene | ! <- PFL 3 Jan 2008 |
492 | 1 | equemene | READ(IOTMP,'(A)') LINE |
493 | 1 | equemene | END DO |
494 | 1 | equemene | READ(IOTMP,'(A)') LINE |
495 | 1 | equemene | READ(IOTMP,'(A)') LINE |
496 | 1 | equemene | DO I=1,Nat |
497 | 1 | equemene | Iat=I |
498 | 1 | equemene | IF (renum) Iat=Order(I) |
499 | 1 | equemene | READ(IOTMP,*) Itmp1,ITmp2, GradCart(3*Iat-2:3*Iat) |
500 | 1 | equemene | END DO |
501 | 1 | equemene | |
502 | 1 | equemene | ! Gaussian gives the Forces in ua/a0, so we convert it into the |
503 | 1 | equemene | ! gradient in ua/Angstrom |
504 | 1 | equemene | gradCart=-1.0d0*Unit*gradCart |
505 | 1 | equemene | |
506 | 1 | equemene | CLOSE(IOTMP) |
507 | 1 | equemene | Energies(IGeom)=E |
508 | 1 | equemene | |
509 | 1 | equemene | ! We convert it into the right coordinate system |
510 | 1 | equemene | ! This should be put into a subroutine (because it is also in egradient) |
511 | 1 | equemene | SELECT CASE (COORD) |
512 | 1 | equemene | CASE ("ZMAT") |
513 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
514 | 1 | equemene | if (debug) WRITE(*,*) "DBG EGRAD Calling CalcBMat_int" |
515 | 1 | equemene | CALL CalcBMat_int (nat, PathCart(1:3*Nat,Igeom), indzmat, dzdc, massat,atome) |
516 | 1 | equemene | CALL ConvGrad_Cart2Int(Nat,dzdc,IndZmat,GradCart,GradTmp) |
517 | 1 | equemene | |
518 | 1 | equemene | Grad(IGeom,1)=GradTmp(4) |
519 | 1 | equemene | Grad(IGeom,2)=GradTmp(7) |
520 | 1 | equemene | ! We might have troubles whith angles that are not in the [0:pi] range because, |
521 | 1 | equemene | ! when converted to catesian coord, they do appear in the [0:Pi] range to gaussian... |
522 | 1 | equemene | ! so that the derivative is not good, and a multiplicative factor should be added... |
523 | 1 | equemene | ! |
524 | 1 | equemene | ! This in fact should be taken care of in B-mat calculation... |
525 | 1 | equemene | ! |
526 | 1 | equemene | IF ((IntCoordF(Igeom,3).LE.0).OR.(IntCoordF(Igeom,3).GE.Pi)) THEN |
527 | 1 | equemene | Grad(IGeom,3)=-1.0d0*GradTmp(8) |
528 | 1 | equemene | ELSE |
529 | 1 | equemene | Grad(IGeom,3)=GradTmp(8) |
530 | 1 | equemene | END IF |
531 | 1 | equemene | Idx=4 |
532 | 1 | equemene | DO I=4,Nat |
533 | 1 | equemene | Grad(IGeom,Idx)=GradTmp(3*i-2) |
534 | 1 | equemene | Grad(IGeom,Idx+1)=GradTmp(3*i-1) |
535 | 1 | equemene | Grad(IGeom,Idx+2)=GradTmp(3*i) |
536 | 1 | equemene | Idx=Idx+3 |
537 | 1 | equemene | END DO |
538 | 1 | equemene | DEALLOCATE(GradTmp) |
539 | 1 | equemene | ! We have the gradient in Cartesian coordinates... which is ok for COORD=Cart, Hybrid |
540 | 1 | equemene | ! but we have to convert it into internal coordinates if COORD=Baker |
541 | 1 | equemene | CASE ('BAKER') |
542 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
543 | 1 | equemene | GradTmp=0.d0 |
544 | 1 | equemene | ! Below is to be corrected. |
545 | 1 | equemene | ! This is inside 'IF ((PROG=="VASP").AND.(RunMode=="PARA")) THEN' |
546 | 1 | equemene | !DO I=1, 3*Nat |
547 | 1 | equemene | ! here GradTmp and Grad are gradients in Baker coordinates |
548 | 1 | equemene | ! Not implemented IF ((PROG=="VASP").AND.(RunMode=="PARA")) |
549 | 1 | equemene | ! GradTmp(:) = GradTmp(:) + BTransInv(:,I)*GradCart(I) |
550 | 1 | equemene | !END DO |
551 | 1 | equemene | Grad(IGeom,:) = GradTmp |
552 | 1 | equemene | DEALLOCATE(GradTmp) |
553 | 1 | equemene | CASE ('MIXED') |
554 | 1 | equemene | ALLOCATE(GradTmp(3*Nat)) |
555 | 1 | equemene | if (debug) WRITE(*,*) "DBG EGRAD Calling CalcBMat_mixed" |
556 | 1 | equemene | CALL CalcBMat_mixed(nat,PathCart(1:3*Nat,IGeom), indzmat, dzdc, massat,atome) |
557 | 1 | equemene | CALL ConvGrad_Cart2Int(Nat,dzdc,IndZmat,GradCart,GradTmp) |
558 | 1 | equemene | DO I=1,Nat |
559 | 1 | equemene | WRITE(*,'(1X,3(1X,F10.5))') GradTmp(3*I-2:3*I) |
560 | 1 | equemene | END DO |
561 | 1 | equemene | SELECT CASE (NCART) |
562 | 1 | equemene | CASE (1) |
563 | 1 | equemene | Grad(IGeom,1:3)=GradTmp(1:3) |
564 | 1 | equemene | Grad(IGeom,4)=GradTmp(4) |
565 | 1 | equemene | Grad(IGeom,5)=GradTmp(7) |
566 | 1 | equemene | Grad(IGeom,6)=GradTmp(8) |
567 | 1 | equemene | Idx=7 |
568 | 1 | equemene | IBeg=4 |
569 | 1 | equemene | CASE(2) |
570 | 1 | equemene | Grad(IGeom,1:3)=GradTmp(1:3) |
571 | 1 | equemene | Grad(IGeom,4:6)=GradTmp(4:6) |
572 | 1 | equemene | Grad(IGeom,7)=GradTmp(7) |
573 | 1 | equemene | Grad(IGeom,8)=GradTmp(8) |
574 | 1 | equemene | Idx=9 |
575 | 1 | equemene | IBeg=4 |
576 | 1 | equemene | CASE DEFAULT |
577 | 1 | equemene | Idx=1 |
578 | 1 | equemene | IBeg=1 |
579 | 1 | equemene | END SELECT |
580 | 1 | equemene | DO I=IBeg,Nat |
581 | 1 | equemene | Grad(IGeom,Idx)=GradTmp(3*i-2) |
582 | 1 | equemene | Grad(IGeom,Idx+1)=GradTmp(3*i-1) |
583 | 1 | equemene | Grad(IGeom,Idx+2)=GradTmp(3*i) |
584 | 1 | equemene | Idx=Idx+3 |
585 | 1 | equemene | END DO |
586 | 1 | equemene | DEALLOCATE(GradTmp) |
587 | 1 | equemene | CASE ("CART","HYBRID") |
588 | 1 | equemene | Grad(IGeom,:)=GradCart |
589 | 1 | equemene | CASE DEFAULT |
590 | 1 | equemene | WRITE(*,*) "Coord=",AdjustL(Trim(COORD))," not yet implemented in EgradPath.L257.STOP" |
591 | 1 | equemene | STOP |
592 | 1 | equemene | END SELECT |
593 | 1 | equemene | |
594 | 1 | equemene | IF (debug) THEN |
595 | 1 | equemene | Line='DBG Path, GradTmp' |
596 | 1 | equemene | Call PrintGeom(Line,Nat,NCoord,reshape(GRad(Igeom,1:NCoord),(/Ncoord/)),Coord,6,Atome,Order,OrderInv,IndZmat) |
597 | 1 | equemene | END IF |
598 | 1 | equemene | |
599 | 1 | equemene | END DO |
600 | 1 | equemene | |
601 | 1 | equemene | CASE DEFAULT |
602 | 1 | equemene | WRITE(*,*) "Prog=",TRIM(Prog)," not yet supported for Para mode." |
603 | 1 | equemene | STOP |
604 | 1 | equemene | END SELECT |
605 | 1 | equemene | |
606 | 1 | equemene | DEALLOCATE(GradCart,PathCart) |
607 | 1 | equemene | |
608 | 1 | equemene | ELSE ! matches IF (RunMode=="PARA") THEN |
609 | 1 | equemene | ! We will launch all calculations sequentially |
610 | 1 | equemene | ALLOCATE(GradTmp(NCoord)) |
611 | 1 | equemene | GeomOld_dummy=0.d0 ! Internal coordinates |
612 | 1 | equemene | GeomCart_old_dummy=0.d0 |
613 | 1 | equemene | ! We have the new path, we calculate its energy and gradient |
614 | 1 | equemene | IGeom0=2 |
615 | 1 | equemene | IGeomF=NGeomF-1 |
616 | 1 | equemene | IF (OptReac) IGeom0=1 |
617 | 1 | equemene | IF (OptProd) IGeomF=NGeomF |
618 | 1 | equemene | ALLOCATE(GeomCart(Nat,3)) |
619 | 1 | equemene | |
620 | 1 | equemene | DO IGeom=IGeom0,IGeomF |
621 | 1 | equemene | WRITE(Line,"('Geometry ',I3,'/',I3,' for iteration ',I3)") Igeom,NgeomF,Iopt |
622 | 1 | equemene | if (debug) WRITE(*,*) Line |
623 | 1 | equemene | SELECT CASE(Coord) |
624 | 1 | equemene | CASE ('ZMAT','MIXED') |
625 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
626 | 1 | equemene | CASE ('BAKER') |
627 | 1 | equemene | GeomTmp=IntCoordF(IGeom,:) |
628 | 1 | equemene | CASE ('CART','HYBRID') |
629 | 1 | equemene | !!! CAUTION : PFL 29.AUG.2008 -> |
630 | 1 | equemene | ! XyzGeomI/F stored in (NGeomI/F,3,Nat) and NOT (NGeomI/F,Nat,3) |
631 | 1 | equemene | ! This should be made consistent !!!!!!!!!!!!!!! |
632 | 1 | equemene | GeomTmp=Reshape(reshape(XyzGeomF(IGeom,:,:),(/Nat,3/),ORDER=(/2,1/)),(/3*Nat/)) |
633 | 1 | equemene | ! GeomTmp=Reshape(XyzGeomF(IGeom,:,:),(/3*Nat/)) |
634 | 1 | equemene | !!! <- CAUTION : PFL 29.AUG.2008 |
635 | 1 | equemene | CASE DEFAULT |
636 | 1 | equemene | WRITE(*,*) "Coord=",TRIM(Coord)," not recognized in EgradPath. L299" |
637 | 1 | equemene | STOP |
638 | 1 | equemene | END SELECT |
639 | 1 | equemene | |
640 | 1 | equemene | !if (debug) WRITE(*,*) "Calling PrintGeom" |
641 | 1 | equemene | !Call PrintGeom(Line,Nat,NCoord,GeomTmp,Coord,IoOut,Atome,Order,OrderInv,IndZmat) |
642 | 1 | equemene | |
643 | 1 | equemene | ! IF (debug) THEN |
644 | 1 | equemene | ! WRITE(*,*) 'DBG Main, COORD=',TRIM(COORD), ' Igeom=',IGeom |
645 | 1 | equemene | ! WRITE(*,'(3(1X,F9.4))') Reshape(Reshape(XyzGeomF(IGeom,:,:),(/Nat,3/),ORDER=(/2,1/)),(/3*Nat/)) |
646 | 1 | equemene | ! WRITE(*,'(3(1X,F9.4))') Reshape(XyzGeomF(IGeom,:,:),(/3*Nat/)) |
647 | 1 | equemene | ! DO Iat=1,Nat |
648 | 1 | equemene | ! WRITE(*,*) XyzGeomF(IGeom,1:3,Iat) |
649 | 1 | equemene | ! END DO |
650 | 1 | equemene | ! END IF |
651 | 1 | equemene | |
652 | 1 | equemene | IF (debug) THEN |
653 | 1 | equemene | WRITE(*,*) 'DBG Main, COORD=',TRIM(COORD),' IGeom=',IGeom,' Iopt=',Iopt |
654 | 1 | equemene | WRITE(*,*) GeomTmp(1:min(NCoord,12)) |
655 | 1 | equemene | END IF |
656 | 1 | equemene | |
657 | 1 | equemene | GeomCart=0.d0 |
658 | 1 | equemene | IF(IOpt .EQ. 1) Then |
659 | 1 | equemene | Print *, 'GeomTmp=' |
660 | 1 | equemene | WRITE(*,'(12(1X,F6.3))') GeomTmp |
661 | 1 | equemene | Print *, 'GeomCart=' |
662 | 1 | equemene | WRITE(*,'(12(1X,F6.3))') GeomCart |
663 | 1 | equemene | END IF |
664 | 1 | equemene | |
665 | 1 | equemene | IF (COORD.EQ.'BAKER') THEN |
666 | 1 | equemene | ! GradTmp is gradient and calculated in Egrad.F, INTENT(OUT). |
667 | 1 | equemene | ! GeomCart has INTENT(OUT) |
668 | 1 | equemene | Call EGrad_baker(E,GeomTmp,GradTmp,NCoord,IGeom,IOpt,GeomCart,Flag_Opt_Geom, & |
669 | 1 | equemene | GeomOld_dummy,GeomCart_old_dummy) |
670 | 1 | equemene | ELSE |
671 | 1 | equemene | Call EGrad(E,GeomTmp,GradTmp,NCoord,IGeom,IOpt,GeomCart,Flag_Opt_Geom) !GeomTmp=IntCoordF(IGeom,:) |
672 | 1 | equemene | END IF |
673 | 1 | equemene | |
674 | 1 | equemene | ! Egrad calls ConvertBakerInternal_cart to convert GeomTmp=IntCoordF(IGeom,:) into |
675 | 1 | equemene | ! GeomCart (Cartesian Coordinates) so that energy and gradients can be calculated |
676 | 1 | equemene | ! for each geometry. |
677 | 1 | equemene | XyzGeomF(IGeom,1,:)=GeomCart(:,1) |
678 | 1 | equemene | XyzGeomF(IGeom,2,:)=GeomCart(:,2) |
679 | 1 | equemene | XyzGeomF(IGeom,3,:)=GeomCart(:,3) |
680 | 1 | equemene | |
681 | 1 | equemene | Energies(IGeom)=E |
682 | 1 | equemene | |
683 | 1 | equemene | if (debug) THEN |
684 | 1 | equemene | Line='DBG Path, GradTmp' |
685 | 1 | equemene | Call PrintGeom(Line,Nat,NCoord,GRadTmp,Coord,6,Atome,Order,OrderInv,IndZmat) |
686 | 1 | equemene | END IF |
687 | 1 | equemene | Grad(IGeom,:)=GradTmp |
688 | 1 | equemene | END DO ! matches DO IGeom=IGeom0,IGeomF |
689 | 1 | equemene | DEALLOCATE(GradTmp,GeomCart) |
690 | 1 | equemene | END IF ! matches IF (RunMode=="PARA") THEN AFTER ELSE |
691 | 1 | equemene | |
692 | 1 | equemene | DEALLOCATE(GeomTmp) |
693 | 1 | equemene | DEALLOCATE(x,y,z) |
694 | 1 | equemene | DEALLOCATE(x_k,y_k,z_k) |
695 | 1 | equemene | DEALLOCATE(GeomOld_dummy,GeomCart_old_dummy) |
696 | 1 | equemene | if (debug) Call header('Exiting EgradPath') |
697 | 1 | equemene | RETURN |
698 | 1 | equemene | 999 WRITE(*,*) "EgradPath : We should not be here !" |
699 | 1 | equemene | STOP |
700 | 1 | equemene | |
701 | 1 | equemene | END SUBROUTINE EGRADPATH |