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Révisions

# Date Auteur Commentaire
780f632a 21/01/2016 14:28 Florent Chuffart

Adding R_tuorial (reduce sampkle set, Sweave script) and adapting package in consequence
b26ac9e7 19/01/2016 18:45 Florent Chuffart

Adding top level functions build_maps and build_count_table
3961deb6 19/09/2015 12:02 Florent Chuffart

Updating documentation
f0a3f2e3 21/07/2015 15:22 Florent Chuffart

Checkng consistency with danpos map in the sweave file
9b38a0af 17/07/2015 16:00 Florent Chuffart

adding last binary to repository
cc54d805 17/07/2015 15:47 Florent Chuffart

Fixing "nb_track" bug in watch_sample function
c25275e2 16/07/2015 18:02 Florent Chuffart

Documenting c2c creation.
bf1d40f3 16/07/2015 16:32 Florent Chuffart

Adding c2c creation feature
3bfae55d 12/06/2015 11:14 Florent Chuffart

Option defaut fix in watch_samples,
plot_fuzzy_nucs = FALSE
3761ede2 18/05/2015 10:09 Florent Chuffart

Removing (comments) buggy version that uses dplyr.
d973538c 05/03/2015 15:31 Florent Chuffart

Using dplyr to filter reads
Fixing bug concernong number of MNase replicate != 3
Adding NEUTRAL_TRANSLATE_CUR parameter in configuration file
3c88abd0 18/07/2014 17:39 Florent Chuffart

Updating README
5badc2fd 18/07/2014 17:34 Florent Chuffart

Publishing version for submission with documentation and tutorial
e5603c3f 18/07/2014 15:27 Florent Chuffart

Adding workdir deps
abfc14b8 18/07/2014 15:25 Florent Chuffart

aggregate nucleominer package, documentation, tutoriel and sweave.
dadb6a4d 11/07/2014 16:43 Florent Chuffart

Natively compute dyad shift an common_wp_pvalue in align_inter_strain_nucs
67157457 08/07/2014 09:43 Florent Chuffart

Activate llr_thres filtering in align_inter_strain_nucs
ec2936ea 03/07/2014 11:22 Florent Chuffart

Keep rejected common nuc in align_inter_strain_nucs
7e2d37e1 27/05/2014 15:05 Florent Chuffart

Adding llr features
37b11e9b 30/04/2014 11:17 Florent Chuffart

Adding min_unr_width check in get_unrs function
6e0010bc 29/04/2014 10:09 Florent Chuffart

Some change for the visualization of chains
4016229d 21/03/2014 18:10 Florent Chuffart

Fixing bug in watch_samples
0d5fbf02 20/03/2014 09:31 Florent Chuffart

Fixing bug in filter_tf_outputs
b69443b5 18/03/2014 17:22 Florent Chuffart

Fixing bug in watch_samples function
d492bca4 18/03/2014 17:15 Florent Chuffart

Fixing bug in watch_samples function

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