Révision 6e0010bc doc/sphinx_doc/rref.rst

b/doc/sphinx_doc/rref.rst
1252 1252
+---------------+---------------------------------------------------+
1253 1253
| Author:       | Florent Chuffart                                  |
1254 1254
+---------------+---------------------------------------------------+
1255
| Version:      | 2.3.39                                            |
1255
| Version:      | 2.3.40                                            |
1256 1256
+---------------+---------------------------------------------------+
1257 1257
| License:      | CeCILL                                            |
1258 1258
+---------------+---------------------------------------------------+
......
1586 1586
        plot_gaussian_unified_reads = TRUE, plot_ellipse_nucs = TRUE, 
1587 1587
        change_col = TRUE, plot_wp_nucs = TRUE, plot_fuzzy_nucs = TRUE, 
1588 1588
        plot_wp_nuc_model = TRUE, plot_common_nucs = FALSE, plot_common_unrs = FALSE, 
1589
        plot_wp_nucs_4_nonmnase = FALSE, plot_chain = FALSE, aggregated_intra_strain_nucs = NULL, 
1590
        aligned_inter_strain_nucs = NULL, height = 10, config = NULL)
1589
        plot_wp_nucs_4_nonmnase = FALSE, plot_chain = FALSE, plot_sample_id = FALSE, 
1590
        aggregated_intra_strain_nucs = NULL, aligned_inter_strain_nucs = NULL, 
1591
        height = 10, main = NULL, xlab = NULL, ylab = "#reads (per million reads)", 
1592
        config = NULL)
1591 1593

  
1592 1594
Arguments
1593 1595
~~~~~~~~~
......
1664 1666

  
1665 1667
Plot (or not) clusterised nuceosomes between mnase samples.
1666 1668

  
1669
``plot_sample_id``
1670

  
1671
Plot (or not) the sample id for each sample.
1672

  
1667 1673
``aggregated_intra_strain_nucs``
1668 1674

  
1669 1675
list of aggregated intra strain nucs. If NULL, it will be computed.
......
1677 1683
Number of reads in per million read for each sample, graphical parametre
1678 1684
for the y axis.
1679 1685

  
1686
``main``
1687

  
1688
main title of the produced plot
1689

  
1690
``xlab``
1691

  
1692
xlab of the produced plot
1693

  
1694
``ylab``
1695

  
1696
ylab of the produced plot
1697

  
1680 1698
``config``
1681 1699

  
1682 1700
GLOBAL config variable

Formats disponibles : Unified diff