Révision 5badc2fd doc/sphinx_doc/readme.rst

b/doc/sphinx_doc/readme.rst
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 - fork
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 - rjson
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 - seqinr
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 - plotrix
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 - DESeq
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 - cachecache https://forge.cbp.ens-lyon.fr/redmine/projects/cachecache
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 - bot https://forge.cbp.ens-lyon.fr/redmine/projects/bot
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 - nucleominer https://forge.cbp.ens-lyon.fr/redmine/projects/nucleominer
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The first packages could be installed by typing the following command in an R console:
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.. code:: bash
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   install.packages(c("fork", "rjson", "seqinr", "plotrix"))
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   source("http://bioconductor.org/biocLite.R")
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   biocLite("DESeq")
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The last packages are available in the git repository they could be install by typing the following command in your terminal:
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.. code:: bash
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  cd nucleominer
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   R CMD INSTALL doc/Chuffart_NM2_workdir/deps/bot_0.14.tar.gz\
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  R CMD INSTALL doc/Chuffart_NM2_workdir/deps/bot_0.14.tar.gz\
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      doc/Chuffart_NM2_workdir/deps/cachecache_0.1.tar.gz\
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      build/nucleominer_2.XXX.tar.gz 
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      build/nucleominer_2.3.46.tar.gz 
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