Révision 5badc2fd README
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Installation |
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The first installation step is to retrieve the source code of |
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MyLabStocks. You can do this by typing the following command in a |
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terminal. |
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git clone http://forge.cbp.ens-lyon.fr/git/nucleominer |
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Prerequisites |
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~~~~~~~~~~~~~ |
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* seqinr |
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* plotrix |
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* DESeq |
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* cachecache https://forge.cbp.ens- |
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lyon.fr/redmine/projects/cachecache |
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* nucleominer https://forge.cbp.ens- |
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lyon.fr/redmine/projects/nucleominer |
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The first packages could be installed by typing the following command |
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in an R console: |
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install.packages(c("fork", "rjson", "seqinr", "plotrix"))
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source("http://bioconductor.org/biocLite.R")
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biocLite("DESeq")
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The last packages are available in the git repository they could be |
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install by typing the following command in your terminal: |
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cd nucleominer |
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R CMD INSTALL doc/Chuffart_NM2_workdir/deps/bot_0.14.tar.gz\ |
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doc/Chuffart_NM2_workdir/deps/cachecache_0.1.tar.gz\ |
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build/nucleominer_2.3.46.tar.gz |
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Formats disponibles : Unified diff