Révision 3961deb6 doc/sphinx_doc/readme.rst
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Installation |
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------------ |
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The first installation step is to retrieve the source code of MyLabStocks. You can do this by typing the following command in a terminal.
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The first installation step is to retrieve the source code of NucleoMiner2. You can do this by typing the following command in a terminal.
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.. code:: bash |
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- seqinr |
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- plotrix |
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- DESeq |
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- cachecache https://forge.cbp.ens-lyon.fr/redmine/projects/cachecache |
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- bot https://forge.cbp.ens-lyon.fr/redmine/projects/bot |
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- nucleominer https://forge.cbp.ens-lyon.fr/redmine/projects/nucleominer |
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The first packages could be installed by typing the following command in an R console:
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These packages can be installed by typing the following command in an R console:
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.. code:: bash |
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source("http://bioconductor.org/biocLite.R")
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biocLite("DESeq")
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The last packages are available in the git repository they could be install by typing the following command in your terminal: |
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Finally,by typing the git command above, you downloaded specific R packages provided with NucleoMiner2 that you now need to install: |
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- cachecache https://forge.cbp.ens-lyon.fr/redmine/projects/cachecache |
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- bot https://forge.cbp.ens-lyon.fr/redmine/projects/bot |
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- nucleominer https://forge.cbp.ens-lyon.fr/redmine/projects/nucleominer |
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To do so, type the following command in your terminal: |
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.. code:: bash |
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