Laboratoire RDP » Biophysics Team » FLORIVAR

#!/usr/bin/env python

# Usage:

# ------

# measure_sepals.py directory filetype

# filetype = '.tif' or '.inr.gz'

from sys import path, argv

import os

import numpy as np

from multiprocessing import Pool

nproc = 11 # number of processors

indir=argv[1]

filetype=argv[2]

outdir=indir+'_measures'

os.system("mkdir -p "+outdir)

os.system("mkdir -p "+outdir+"/sections")

os.system("mkdir -p "+outdir+"/projections")

def one_simulation(param):

        if filetype in param:

                filename=param

                os.system("measure_sepal.py "+filename+" "+outdir)

        return

list_params=[indir+'/'+filename for filename in os.listdir(indir)]

pool = Pool(processes=nproc)

pool.map(one_simulation, list_params)

pool.close()

pool.join()