Révision 270
ETSN/MyDFT_1.py (revision 270) | ||
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#!/usr/bin/env python3 |
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import numpy as np |
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import pyopencl as cl |
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# piling 16 arithmetical functions |
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def MySillyFunction(x): |
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return(np.power(np.sqrt(np.log(np.exp(np.arctanh(np.tanh(np.arcsinh(np.sinh(np.arccosh(np.cosh(np.arctan(np.tan(np.arcsin(np.sin(np.arccos(np.cos(x))))))))))))))),2)) |
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# Native Operation under Numpy (for prototyping & tests |
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def NativeAddition(a_np,b_np): |
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return(a_np+b_np) |
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|
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# Native Operation with MySillyFunction under Numpy (for prototyping & tests |
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def NativeSillyAddition(a_np,b_np): |
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return(MySillyFunction(a_np)+MySillyFunction(b_np)) |
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|
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# Naive Discrete Fourier Transform |
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def MyDFT(x,y): |
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from numpy import pi,cos,sin |
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size=x.shape[0] |
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X=np.zeros(size).astype(np.float32) |
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Y=np.zeros(size).astype(np.float32) |
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for i in range(size): |
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for j in range(size): |
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X[i]=X[i]+x[j]*cos(2.*pi*i*j/size)-y[j]*sin(2.*pi*i*j/size) |
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Y[i]=Y[i]+x[j]*sin(2.*pi*i*j/size)+y[j]*cos(2.*pi*i*j/size) |
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return(X,Y) |
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# CUDA complete operation |
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def CUDAAddition(a_np,b_np): |
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import pycuda.autoinit |
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import pycuda.driver as drv |
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import numpy |
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from pycuda.compiler import SourceModule |
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mod = SourceModule(""" |
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__global__ void sum(float *dest, float *a, float *b) |
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{ |
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// const int i = threadIdx.x; |
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const int i = blockIdx.x; |
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dest[i] = a[i] + b[i]; |
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} |
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""") |
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# sum = mod.get_function("sum") |
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sum = mod.get_function("sum") |
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res_np = numpy.zeros_like(a_np) |
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sum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
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block=(1,1,1), grid=(a_np.size,1)) |
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return(res_np) |
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|
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# CUDA Silly complete operation |
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def CUDASillyAddition(a_np,b_np): |
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import pycuda.autoinit |
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import pycuda.driver as drv |
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import numpy |
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from pycuda.compiler import SourceModule |
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TimeIn=time.time() |
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mod = SourceModule(""" |
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__device__ float MySillyFunction(float x) |
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{ |
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return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
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} |
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__global__ void sillysum(float *dest, float *a, float *b) |
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{ |
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const int i = blockIdx.x; |
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dest[i] = MySillyFunction(a[i]) + MySillyFunction(b[i]); |
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} |
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""") |
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Elapsed=time.time()-TimeIn |
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print("Definition of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# sum = mod.get_function("sum") |
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sillysum = mod.get_function("sillysum") |
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Elapsed=time.time()-TimeIn |
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print("Synthesis of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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res_np = numpy.zeros_like(a_np) |
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Elapsed=time.time()-TimeIn |
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print("Allocation on Host for results : %.3f" % Elapsed) |
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TimeIn=time.time() |
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sillysum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
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block=(1,1,1), grid=(a_np.size,1)) |
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Elapsed=time.time()-TimeIn |
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print("Execution of kernel : %.3f" % Elapsed) |
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return(res_np) |
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# OpenCL complete operation |
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def OpenCLAddition(a_np,b_np): |
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# Context creation |
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ctx = cl.create_some_context() |
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# Every process is stored in a queue |
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queue = cl.CommandQueue(ctx) |
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TimeIn=time.time() |
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# Copy from Host to Device using pointers |
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mf = cl.mem_flags |
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a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
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b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
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Elapsed=time.time()-TimeIn |
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print("Copy from Host 2 Device : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Definition of kernel under OpenCL |
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prg = cl.Program(ctx, """ |
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__kernel void sum( |
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__global const float *a_g, __global const float *b_g, __global float *res_g) |
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{ |
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int gid = get_global_id(0); |
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res_g[gid] = a_g[gid] + b_g[gid]; |
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} |
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""").build() |
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Elapsed=time.time()-TimeIn |
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print("Building kernels : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Memory allocation on Device for result |
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res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
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Elapsed=time.time()-TimeIn |
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print("Allocation on Device for results : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Synthesis of function "sum" inside Kernel Sources |
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knl = prg.sum # Use this Kernel object for repeated calls |
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Elapsed=time.time()-TimeIn |
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print("Synthesis of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Call of kernel previously defined |
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knl(queue, a_np.shape, None, a_g, b_g, res_g) |
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Elapsed=time.time()-TimeIn |
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print("Execution of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Creation of vector for result with same size as input vectors |
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res_np = np.empty_like(a_np) |
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Elapsed=time.time()-TimeIn |
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print("Allocation on Host for results: %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Copy from Device to Host |
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cl.enqueue_copy(queue, res_np, res_g) |
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Elapsed=time.time()-TimeIn |
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print("Copy from Device 2 Host : %.3f" % Elapsed) |
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return(res_np) |
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# OpenCL complete operation |
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def OpenCLSillyAddition(a_np,b_np): |
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# Context creation |
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ctx = cl.create_some_context() |
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# Every process is stored in a queue |
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queue = cl.CommandQueue(ctx) |
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|
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TimeIn=time.time() |
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# Copy from Host to Device using pointers |
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mf = cl.mem_flags |
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a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
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b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
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Elapsed=time.time()-TimeIn |
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print("Copy from Host 2 Device : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Definition of kernel under OpenCL |
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prg = cl.Program(ctx, """ |
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|
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float MySillyFunction(float x) |
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{ |
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return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
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} |
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__kernel void sillysum( |
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__global const float *a_g, __global const float *b_g, __global float *res_g) |
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{ |
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int gid = get_global_id(0); |
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res_g[gid] = MySillyFunction(a_g[gid]) + MySillyFunction(b_g[gid]); |
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} |
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__kernel void sum( |
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__global const float *a_g, __global const float *b_g, __global float *res_g) |
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{ |
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int gid = get_global_id(0); |
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res_g[gid] = a_g[gid] + b_g[gid]; |
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} |
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""").build() |
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Elapsed=time.time()-TimeIn |
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print("Building kernels : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Memory allocation on Device for result |
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res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
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Elapsed=time.time()-TimeIn |
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print("Allocation on Device for results : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Synthesis of function "sillysum" inside Kernel Sources |
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knl = prg.sillysum # Use this Kernel object for repeated calls |
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Elapsed=time.time()-TimeIn |
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print("Synthesis of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Call of kernel previously defined |
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CallCL=knl(queue, a_np.shape, None, a_g, b_g, res_g) |
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# |
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CallCL.wait() |
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Elapsed=time.time()-TimeIn |
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print("Execution of kernel : %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Creation of vector for result with same size as input vectors |
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res_np = np.empty_like(a_np) |
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Elapsed=time.time()-TimeIn |
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print("Allocation on Host for results: %.3f" % Elapsed) |
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TimeIn=time.time() |
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# Copy from Device to Host |
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cl.enqueue_copy(queue, res_np, res_g) |
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Elapsed=time.time()-TimeIn |
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print("Copy from Device 2 Host : %.3f" % Elapsed) |
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return(res_np) |
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import sys |
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import time |
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if __name__=='__main__': |
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# Size of input vectors definition based on stdin |
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import sys |
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try: |
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SIZE=int(sys.argv[1]) |
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print("Size of vectors set to %i" % SIZE) |
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except: |
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SIZE=50000 |
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print("Size of vectors set to default size %i" % SIZE) |
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|
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# a_np = np.random.rand(SIZE).astype(np.float32) |
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# b_np = np.random.rand(SIZE).astype(np.float32) |
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a_np = np.ones(SIZE).astype(np.float32) |
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b_np = np.ones(SIZE).astype(np.float32) |
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|
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# Native Implementation |
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TimeIn=time.time() |
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# res_np=NativeAddition(a_np,b_np) |
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# res_np=NativeSillyAddition(a_np,b_np) |
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c_np,d_np=MyDFT(a_np,b_np) |
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NativeElapsed=time.time()-TimeIn |
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NativeRate=int(SIZE/NativeElapsed) |
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print("NativeRate: %i" % NativeRate) |
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print(c_np,d_np) |
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# # OpenCL Implementation |
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# TimeIn=time.time() |
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# # res_cl=OpenCLAddition(a_np,b_np) |
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# res_cl=OpenCLSillyAddition(a_np,b_np) |
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# OpenCLElapsed=time.time()-TimeIn |
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# OpenCLRate=int(SIZE/OpenCLElapsed) |
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# print("OpenCLRate: %i" % OpenCLRate) |
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# # CUDA Implementation |
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# TimeIn=time.time() |
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# # res_cuda=CUDAAddition(a_np,b_np) |
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# res_cuda=CUDASillyAddition(a_np,b_np) |
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# CUDAElapsed=time.time()-TimeIn |
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# CUDARate=int(SIZE/CUDAElapsed) |
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# print("CUDARate: %i" % CUDARate) |
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# print("OpenCLvsNative ratio: %f" % (OpenCLRate/NativeRate)) |
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# print("CUDAvsNative ratio: %f" % (CUDARate/NativeRate)) |
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# # Check on OpenCL with Numpy: |
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# print(res_cl - res_np) |
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# print(np.linalg.norm(res_cl - res_np)) |
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# try: |
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# assert np.allclose(res_np, res_cl) |
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# except: |
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# print("Results between Native & OpenCL seem to be too different!") |
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|
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# # Check on CUDA with Numpy: |
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# print(res_cuda - res_np) |
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# print(np.linalg.norm(res_cuda - res_np)) |
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# try: |
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# assert np.allclose(res_np, res_cuda) |
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# except: |
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# print("Results between Native & CUDA seem to be too different!") |
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0 | 299 |
ETSN/MyDFT_2.py (revision 270) | ||
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1 |
#!/usr/bin/env python3 |
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2 |
|
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3 |
import numpy as np |
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4 |
import pyopencl as cl |
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5 |
|
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6 |
# piling 16 arithmetical functions |
|
7 |
def MySillyFunction(x): |
|
8 |
return(np.power(np.sqrt(np.log(np.exp(np.arctanh(np.tanh(np.arcsinh(np.sinh(np.arccosh(np.cosh(np.arctan(np.tan(np.arcsin(np.sin(np.arccos(np.cos(x))))))))))))))),2)) |
|
9 |
|
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10 |
# Native Operation under Numpy (for prototyping & tests |
|
11 |
def NativeAddition(a_np,b_np): |
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12 |
return(a_np+b_np) |
|
13 |
|
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14 |
# Native Operation with MySillyFunction under Numpy (for prototyping & tests |
|
15 |
def NativeSillyAddition(a_np,b_np): |
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16 |
return(MySillyFunction(a_np)+MySillyFunction(b_np)) |
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17 |
|
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18 |
# Naive Discrete Fourier Transform |
|
19 |
def MyDFT(x,y): |
|
20 |
from numpy import pi,cos,sin |
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21 |
size=x.shape[0] |
|
22 |
X=np.zeros(size).astype(np.float32) |
|
23 |
Y=np.zeros(size).astype(np.float32) |
|
24 |
for i in range(size): |
|
25 |
for j in range(size): |
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26 |
X[i]=X[i]+x[j]*cos(2.*pi*i*j/size)-y[j]*sin(2.*pi*i*j/size) |
|
27 |
Y[i]=Y[i]+x[j]*sin(2.*pi*i*j/size)+y[j]*cos(2.*pi*i*j/size) |
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28 |
return(X,Y) |
|
29 |
|
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30 |
# Numpy Discrete Fourier Transform |
|
31 |
def NumpyDFT(x,y): |
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32 |
from numpy import pi,cos,sin |
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33 |
size=x.shape[0] |
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34 |
X=np.zeros(size).astype(np.float32) |
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35 |
Y=np.zeros(size).astype(np.float32) |
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36 |
nj=np.multiply(2.0*np.pi/size,np.arange(size)).astype(np.float32) |
|
37 |
for i in range(size): |
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38 |
X[i]=np.sum(np.subtract(np.multiply(np.cos(i*nj),x),np.multiply(np.sin(i*nj),y))) |
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39 |
Y[i]=np.sum(np.add(np.multiply(np.sin(i*nj),x),np.multiply(np.cos(i*nj),y))) |
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40 |
return(X,Y) |
|
41 |
|
|
42 |
# CUDA complete operation |
|
43 |
def CUDAAddition(a_np,b_np): |
|
44 |
import pycuda.autoinit |
|
45 |
import pycuda.driver as drv |
|
46 |
import numpy |
|
47 |
|
|
48 |
from pycuda.compiler import SourceModule |
|
49 |
mod = SourceModule(""" |
|
50 |
__global__ void sum(float *dest, float *a, float *b) |
|
51 |
{ |
|
52 |
// const int i = threadIdx.x; |
|
53 |
const int i = blockIdx.x; |
|
54 |
dest[i] = a[i] + b[i]; |
|
55 |
} |
|
56 |
""") |
|
57 |
|
|
58 |
# sum = mod.get_function("sum") |
|
59 |
sum = mod.get_function("sum") |
|
60 |
|
|
61 |
res_np = numpy.zeros_like(a_np) |
|
62 |
sum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
|
63 |
block=(1,1,1), grid=(a_np.size,1)) |
|
64 |
return(res_np) |
|
65 |
|
|
66 |
# CUDA Silly complete operation |
|
67 |
def CUDASillyAddition(a_np,b_np): |
|
68 |
import pycuda.autoinit |
|
69 |
import pycuda.driver as drv |
|
70 |
import numpy |
|
71 |
|
|
72 |
from pycuda.compiler import SourceModule |
|
73 |
TimeIn=time.time() |
|
74 |
mod = SourceModule(""" |
|
75 |
__device__ float MySillyFunction(float x) |
|
76 |
{ |
|
77 |
return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
|
78 |
} |
|
79 |
|
|
80 |
__global__ void sillysum(float *dest, float *a, float *b) |
|
81 |
{ |
|
82 |
const int i = blockIdx.x; |
|
83 |
dest[i] = MySillyFunction(a[i]) + MySillyFunction(b[i]); |
|
84 |
} |
|
85 |
""") |
|
86 |
Elapsed=time.time()-TimeIn |
|
87 |
print("Definition of kernel : %.3f" % Elapsed) |
|
88 |
|
|
89 |
TimeIn=time.time() |
|
90 |
# sum = mod.get_function("sum") |
|
91 |
sillysum = mod.get_function("sillysum") |
|
92 |
Elapsed=time.time()-TimeIn |
|
93 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
94 |
|
|
95 |
TimeIn=time.time() |
|
96 |
res_np = numpy.zeros_like(a_np) |
|
97 |
Elapsed=time.time()-TimeIn |
|
98 |
print("Allocation on Host for results : %.3f" % Elapsed) |
|
99 |
|
|
100 |
TimeIn=time.time() |
|
101 |
sillysum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
|
102 |
block=(1,1,1), grid=(a_np.size,1)) |
|
103 |
Elapsed=time.time()-TimeIn |
|
104 |
print("Execution of kernel : %.3f" % Elapsed) |
|
105 |
return(res_np) |
|
106 |
|
|
107 |
# OpenCL complete operation |
|
108 |
def OpenCLAddition(a_np,b_np): |
|
109 |
|
|
110 |
# Context creation |
|
111 |
ctx = cl.create_some_context() |
|
112 |
# Every process is stored in a queue |
|
113 |
queue = cl.CommandQueue(ctx) |
|
114 |
|
|
115 |
TimeIn=time.time() |
|
116 |
# Copy from Host to Device using pointers |
|
117 |
mf = cl.mem_flags |
|
118 |
a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
|
119 |
b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
|
120 |
Elapsed=time.time()-TimeIn |
|
121 |
print("Copy from Host 2 Device : %.3f" % Elapsed) |
|
122 |
|
|
123 |
TimeIn=time.time() |
|
124 |
# Definition of kernel under OpenCL |
|
125 |
prg = cl.Program(ctx, """ |
|
126 |
__kernel void sum( |
|
127 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
|
128 |
{ |
|
129 |
int gid = get_global_id(0); |
|
130 |
res_g[gid] = a_g[gid] + b_g[gid]; |
|
131 |
} |
|
132 |
""").build() |
|
133 |
Elapsed=time.time()-TimeIn |
|
134 |
print("Building kernels : %.3f" % Elapsed) |
|
135 |
|
|
136 |
TimeIn=time.time() |
|
137 |
# Memory allocation on Device for result |
|
138 |
res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
|
139 |
Elapsed=time.time()-TimeIn |
|
140 |
print("Allocation on Device for results : %.3f" % Elapsed) |
|
141 |
|
|
142 |
TimeIn=time.time() |
|
143 |
# Synthesis of function "sum" inside Kernel Sources |
|
144 |
knl = prg.sum # Use this Kernel object for repeated calls |
|
145 |
Elapsed=time.time()-TimeIn |
|
146 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
147 |
|
|
148 |
TimeIn=time.time() |
|
149 |
# Call of kernel previously defined |
|
150 |
knl(queue, a_np.shape, None, a_g, b_g, res_g) |
|
151 |
Elapsed=time.time()-TimeIn |
|
152 |
print("Execution of kernel : %.3f" % Elapsed) |
|
153 |
|
|
154 |
TimeIn=time.time() |
|
155 |
# Creation of vector for result with same size as input vectors |
|
156 |
res_np = np.empty_like(a_np) |
|
157 |
Elapsed=time.time()-TimeIn |
|
158 |
print("Allocation on Host for results: %.3f" % Elapsed) |
|
159 |
|
|
160 |
TimeIn=time.time() |
|
161 |
# Copy from Device to Host |
|
162 |
cl.enqueue_copy(queue, res_np, res_g) |
|
163 |
Elapsed=time.time()-TimeIn |
|
164 |
print("Copy from Device 2 Host : %.3f" % Elapsed) |
|
165 |
|
|
166 |
return(res_np) |
|
167 |
|
|
168 |
# OpenCL complete operation |
|
169 |
def OpenCLSillyAddition(a_np,b_np): |
|
170 |
|
|
171 |
# Context creation |
|
172 |
ctx = cl.create_some_context() |
|
173 |
# Every process is stored in a queue |
|
174 |
queue = cl.CommandQueue(ctx) |
|
175 |
|
|
176 |
TimeIn=time.time() |
|
177 |
# Copy from Host to Device using pointers |
|
178 |
mf = cl.mem_flags |
|
179 |
a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
|
180 |
b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
|
181 |
Elapsed=time.time()-TimeIn |
|
182 |
print("Copy from Host 2 Device : %.3f" % Elapsed) |
|
183 |
|
|
184 |
TimeIn=time.time() |
|
185 |
# Definition of kernel under OpenCL |
|
186 |
prg = cl.Program(ctx, """ |
|
187 |
|
|
188 |
float MySillyFunction(float x) |
|
189 |
{ |
|
190 |
return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
|
191 |
} |
|
192 |
|
|
193 |
__kernel void sillysum( |
|
194 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
|
195 |
{ |
|
196 |
int gid = get_global_id(0); |
|
197 |
res_g[gid] = MySillyFunction(a_g[gid]) + MySillyFunction(b_g[gid]); |
|
198 |
} |
|
199 |
|
|
200 |
__kernel void sum( |
|
201 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
|
202 |
{ |
|
203 |
int gid = get_global_id(0); |
|
204 |
res_g[gid] = a_g[gid] + b_g[gid]; |
|
205 |
} |
|
206 |
""").build() |
|
207 |
Elapsed=time.time()-TimeIn |
|
208 |
print("Building kernels : %.3f" % Elapsed) |
|
209 |
|
|
210 |
TimeIn=time.time() |
|
211 |
# Memory allocation on Device for result |
|
212 |
res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
|
213 |
Elapsed=time.time()-TimeIn |
|
214 |
print("Allocation on Device for results : %.3f" % Elapsed) |
|
215 |
|
|
216 |
TimeIn=time.time() |
|
217 |
# Synthesis of function "sillysum" inside Kernel Sources |
|
218 |
knl = prg.sillysum # Use this Kernel object for repeated calls |
|
219 |
Elapsed=time.time()-TimeIn |
|
220 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
221 |
|
|
222 |
TimeIn=time.time() |
|
223 |
# Call of kernel previously defined |
|
224 |
CallCL=knl(queue, a_np.shape, None, a_g, b_g, res_g) |
|
225 |
# |
|
226 |
CallCL.wait() |
|
227 |
Elapsed=time.time()-TimeIn |
|
228 |
print("Execution of kernel : %.3f" % Elapsed) |
|
229 |
|
|
230 |
TimeIn=time.time() |
|
231 |
# Creation of vector for result with same size as input vectors |
|
232 |
res_np = np.empty_like(a_np) |
|
233 |
Elapsed=time.time()-TimeIn |
|
234 |
print("Allocation on Host for results: %.3f" % Elapsed) |
|
235 |
|
|
236 |
TimeIn=time.time() |
|
237 |
# Copy from Device to Host |
|
238 |
cl.enqueue_copy(queue, res_np, res_g) |
|
239 |
Elapsed=time.time()-TimeIn |
|
240 |
print("Copy from Device 2 Host : %.3f" % Elapsed) |
|
241 |
|
|
242 |
return(res_np) |
|
243 |
|
|
244 |
import sys |
|
245 |
import time |
|
246 |
|
|
247 |
if __name__=='__main__': |
|
248 |
|
|
249 |
# Size of input vectors definition based on stdin |
|
250 |
import sys |
|
251 |
try: |
|
252 |
SIZE=int(sys.argv[1]) |
|
253 |
print("Size of vectors set to %i" % SIZE) |
|
254 |
except: |
|
255 |
SIZE=50000 |
|
256 |
print("Size of vectors set to default size %i" % SIZE) |
|
257 |
|
|
258 |
# a_np = np.random.rand(SIZE).astype(np.float32) |
|
259 |
# b_np = np.random.rand(SIZE).astype(np.float32) |
|
260 |
|
|
261 |
a_np = np.ones(SIZE).astype(np.float32) |
|
262 |
b_np = np.ones(SIZE).astype(np.float32) |
|
263 |
|
|
264 |
# Native & Naive Implementation |
|
265 |
print("Performing naive implementation") |
|
266 |
TimeIn=time.time() |
|
267 |
c_np,d_np=MyDFT(a_np,b_np) |
|
268 |
NativeElapsed=time.time()-TimeIn |
|
269 |
NativeRate=int(SIZE/NativeElapsed) |
|
270 |
print("NativeRate: %i" % NativeRate) |
|
271 |
print(c_np,d_np) |
|
272 |
|
|
273 |
# Native & Numpy Implementation |
|
274 |
print("Performing Numpy implementation") |
|
275 |
TimeIn=time.time() |
|
276 |
e_np,f_np=NumpyDFT(a_np,b_np) |
|
277 |
NumpyElapsed=time.time()-TimeIn |
|
278 |
NumpyRate=int(SIZE/NumpyElapsed) |
|
279 |
print("NumpyRate: %i" % NumpyRate) |
|
280 |
print(e_np,f_np) |
|
281 |
|
|
282 |
print(np.linalg.norm(c_np-e_np)) |
|
283 |
print(np.linalg.norm(d_np-f_np)) |
|
284 |
|
|
285 |
# # OpenCL Implementation |
|
286 |
# TimeIn=time.time() |
|
287 |
# # res_cl=OpenCLAddition(a_np,b_np) |
|
288 |
# res_cl=OpenCLSillyAddition(a_np,b_np) |
|
289 |
# OpenCLElapsed=time.time()-TimeIn |
|
290 |
# OpenCLRate=int(SIZE/OpenCLElapsed) |
|
291 |
# print("OpenCLRate: %i" % OpenCLRate) |
|
292 |
|
|
293 |
# # CUDA Implementation |
|
294 |
# TimeIn=time.time() |
|
295 |
# # res_cuda=CUDAAddition(a_np,b_np) |
|
296 |
# res_cuda=CUDASillyAddition(a_np,b_np) |
|
297 |
# CUDAElapsed=time.time()-TimeIn |
|
298 |
# CUDARate=int(SIZE/CUDAElapsed) |
|
299 |
# print("CUDARate: %i" % CUDARate) |
|
300 |
|
|
301 |
# print("OpenCLvsNative ratio: %f" % (OpenCLRate/NativeRate)) |
|
302 |
# print("CUDAvsNative ratio: %f" % (CUDARate/NativeRate)) |
|
303 |
|
|
304 |
# # Check on OpenCL with Numpy: |
|
305 |
# print(res_cl - res_np) |
|
306 |
# print(np.linalg.norm(res_cl - res_np)) |
|
307 |
# try: |
|
308 |
# assert np.allclose(res_np, res_cl) |
|
309 |
# except: |
|
310 |
# print("Results between Native & OpenCL seem to be too different!") |
|
311 |
|
|
312 |
# # Check on CUDA with Numpy: |
|
313 |
# print(res_cuda - res_np) |
|
314 |
# print(np.linalg.norm(res_cuda - res_np)) |
|
315 |
# try: |
|
316 |
# assert np.allclose(res_np, res_cuda) |
|
317 |
# except: |
|
318 |
# print("Results between Native & CUDA seem to be too different!") |
|
319 |
|
|
320 |
|
|
0 | 321 |
ETSN/MyDFT_3.py (revision 270) | ||
---|---|---|
1 |
#!/usr/bin/env python3 |
|
2 |
|
|
3 |
import numpy as np |
|
4 |
import pyopencl as cl |
|
5 |
from numpy import pi,cos,sin |
|
6 |
|
|
7 |
# piling 16 arithmetical functions |
|
8 |
def MySillyFunction(x): |
|
9 |
return(np.power(np.sqrt(np.log(np.exp(np.arctanh(np.tanh(np.arcsinh(np.sinh(np.arccosh(np.cosh(np.arctan(np.tan(np.arcsin(np.sin(np.arccos(np.cos(x))))))))))))))),2)) |
|
10 |
|
|
11 |
# Native Operation under Numpy (for prototyping & tests |
|
12 |
def NativeAddition(a_np,b_np): |
|
13 |
return(a_np+b_np) |
|
14 |
|
|
15 |
# Native Operation with MySillyFunction under Numpy (for prototyping & tests |
|
16 |
def NativeSillyAddition(a_np,b_np): |
|
17 |
return(MySillyFunction(a_np)+MySillyFunction(b_np)) |
|
18 |
|
|
19 |
# Naive Discrete Fourier Transform |
|
20 |
def MyDFT(x,y): |
|
21 |
from numpy import pi,cos,sin |
|
22 |
size=x.shape[0] |
|
23 |
X=np.zeros(size).astype(np.float32) |
|
24 |
Y=np.zeros(size).astype(np.float32) |
|
25 |
for i in range(size): |
|
26 |
for j in range(size): |
|
27 |
X[i]=X[i]+x[j]*cos(2.*pi*i*j/size)-y[j]*sin(2.*pi*i*j/size) |
|
28 |
Y[i]=Y[i]+x[j]*sin(2.*pi*i*j/size)+y[j]*cos(2.*pi*i*j/size) |
|
29 |
return(X,Y) |
|
30 |
|
|
31 |
# Numpy Discrete Fourier Transform |
|
32 |
def NumpyDFT(x,y): |
|
33 |
size=x.shape[0] |
|
34 |
X=np.zeros(size).astype(np.float32) |
|
35 |
Y=np.zeros(size).astype(np.float32) |
|
36 |
nj=np.multiply(2.0*np.pi/size,np.arange(size)).astype(np.float32) |
|
37 |
for i in range(size): |
|
38 |
X[i]=np.sum(np.subtract(np.multiply(np.cos(i*nj),x),np.multiply(np.sin(i*nj),y))) |
|
39 |
Y[i]=np.sum(np.add(np.multiply(np.sin(i*nj),x),np.multiply(np.cos(i*nj),y))) |
|
40 |
return(X,Y) |
|
41 |
|
|
42 |
# Numba Discrete Fourier Transform |
|
43 |
import numba |
|
44 |
@numba.njit(parallel=True) |
|
45 |
def NumbaDFT(x,y): |
|
46 |
size=x.shape[0] |
|
47 |
X=np.zeros(size) |
|
48 |
Y=np.zeros(size) |
|
49 |
nj=np.multiply(2.0*np.pi/size,np.arange(size)).astype(np.float32) |
|
50 |
for i in numba.prange(size): |
|
51 |
X[i]=np.sum(np.subtract(np.multiply(np.cos(i*nj),x),np.multiply(np.sin(i*nj),y))) |
|
52 |
Y[i]=np.sum(np.add(np.multiply(np.sin(i*nj),x),np.multiply(np.cos(i*nj),y))) |
|
53 |
return(X,Y) |
|
54 |
|
|
55 |
# CUDA complete operation |
|
56 |
def CUDAAddition(a_np,b_np): |
|
57 |
import pycuda.autoinit |
|
58 |
import pycuda.driver as drv |
|
59 |
import numpy |
|
60 |
|
|
61 |
from pycuda.compiler import SourceModule |
|
62 |
mod = SourceModule(""" |
|
63 |
__global__ void sum(float *dest, float *a, float *b) |
|
64 |
{ |
|
65 |
// const int i = threadIdx.x; |
|
66 |
const int i = blockIdx.x; |
|
67 |
dest[i] = a[i] + b[i]; |
|
68 |
} |
|
69 |
""") |
|
70 |
|
|
71 |
# sum = mod.get_function("sum") |
|
72 |
sum = mod.get_function("sum") |
|
73 |
|
|
74 |
res_np = numpy.zeros_like(a_np) |
|
75 |
sum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
|
76 |
block=(1,1,1), grid=(a_np.size,1)) |
|
77 |
return(res_np) |
|
78 |
|
|
79 |
# CUDA Silly complete operation |
|
80 |
def CUDASillyAddition(a_np,b_np): |
|
81 |
import pycuda.autoinit |
|
82 |
import pycuda.driver as drv |
|
83 |
import numpy |
|
84 |
|
|
85 |
from pycuda.compiler import SourceModule |
|
86 |
TimeIn=time.time() |
|
87 |
mod = SourceModule(""" |
|
88 |
__device__ float MySillyFunction(float x) |
|
89 |
{ |
|
90 |
return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
|
91 |
} |
|
92 |
|
|
93 |
__global__ void sillysum(float *dest, float *a, float *b) |
|
94 |
{ |
|
95 |
const int i = blockIdx.x; |
|
96 |
dest[i] = MySillyFunction(a[i]) + MySillyFunction(b[i]); |
|
97 |
} |
|
98 |
""") |
|
99 |
Elapsed=time.time()-TimeIn |
|
100 |
print("Definition of kernel : %.3f" % Elapsed) |
|
101 |
|
|
102 |
TimeIn=time.time() |
|
103 |
# sum = mod.get_function("sum") |
|
104 |
sillysum = mod.get_function("sillysum") |
|
105 |
Elapsed=time.time()-TimeIn |
|
106 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
107 |
|
|
108 |
TimeIn=time.time() |
|
109 |
res_np = numpy.zeros_like(a_np) |
|
110 |
Elapsed=time.time()-TimeIn |
|
111 |
print("Allocation on Host for results : %.3f" % Elapsed) |
|
112 |
|
|
113 |
TimeIn=time.time() |
|
114 |
sillysum(drv.Out(res_np), drv.In(a_np), drv.In(b_np), |
|
115 |
block=(1,1,1), grid=(a_np.size,1)) |
|
116 |
Elapsed=time.time()-TimeIn |
|
117 |
print("Execution of kernel : %.3f" % Elapsed) |
|
118 |
return(res_np) |
|
119 |
|
|
120 |
# OpenCL complete operation |
|
121 |
def OpenCLAddition(a_np,b_np): |
|
122 |
|
|
123 |
# Context creation |
|
124 |
ctx = cl.create_some_context() |
|
125 |
# Every process is stored in a queue |
|
126 |
queue = cl.CommandQueue(ctx) |
|
127 |
|
|
128 |
TimeIn=time.time() |
|
129 |
# Copy from Host to Device using pointers |
|
130 |
mf = cl.mem_flags |
|
131 |
a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
|
132 |
b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
|
133 |
Elapsed=time.time()-TimeIn |
|
134 |
print("Copy from Host 2 Device : %.3f" % Elapsed) |
|
135 |
|
|
136 |
TimeIn=time.time() |
|
137 |
# Definition of kernel under OpenCL |
|
138 |
prg = cl.Program(ctx, """ |
|
139 |
__kernel void sum( |
|
140 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
|
141 |
{ |
|
142 |
int gid = get_global_id(0); |
|
143 |
res_g[gid] = a_g[gid] + b_g[gid]; |
|
144 |
} |
|
145 |
""").build() |
|
146 |
Elapsed=time.time()-TimeIn |
|
147 |
print("Building kernels : %.3f" % Elapsed) |
|
148 |
|
|
149 |
TimeIn=time.time() |
|
150 |
# Memory allocation on Device for result |
|
151 |
res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
|
152 |
Elapsed=time.time()-TimeIn |
|
153 |
print("Allocation on Device for results : %.3f" % Elapsed) |
|
154 |
|
|
155 |
TimeIn=time.time() |
|
156 |
# Synthesis of function "sum" inside Kernel Sources |
|
157 |
knl = prg.sum # Use this Kernel object for repeated calls |
|
158 |
Elapsed=time.time()-TimeIn |
|
159 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
160 |
|
|
161 |
TimeIn=time.time() |
|
162 |
# Call of kernel previously defined |
|
163 |
knl(queue, a_np.shape, None, a_g, b_g, res_g) |
|
164 |
Elapsed=time.time()-TimeIn |
|
165 |
print("Execution of kernel : %.3f" % Elapsed) |
|
166 |
|
|
167 |
TimeIn=time.time() |
|
168 |
# Creation of vector for result with same size as input vectors |
|
169 |
res_np = np.empty_like(a_np) |
|
170 |
Elapsed=time.time()-TimeIn |
|
171 |
print("Allocation on Host for results: %.3f" % Elapsed) |
|
172 |
|
|
173 |
TimeIn=time.time() |
|
174 |
# Copy from Device to Host |
|
175 |
cl.enqueue_copy(queue, res_np, res_g) |
|
176 |
Elapsed=time.time()-TimeIn |
|
177 |
print("Copy from Device 2 Host : %.3f" % Elapsed) |
|
178 |
|
|
179 |
return(res_np) |
|
180 |
|
|
181 |
# OpenCL complete operation |
|
182 |
def OpenCLSillyAddition(a_np,b_np): |
|
183 |
|
|
184 |
# Context creation |
|
185 |
ctx = cl.create_some_context() |
|
186 |
# Every process is stored in a queue |
|
187 |
queue = cl.CommandQueue(ctx) |
|
188 |
|
|
189 |
TimeIn=time.time() |
|
190 |
# Copy from Host to Device using pointers |
|
191 |
mf = cl.mem_flags |
|
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a_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=a_np) |
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193 |
b_g = cl.Buffer(ctx, mf.READ_ONLY | mf.COPY_HOST_PTR, hostbuf=b_np) |
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194 |
Elapsed=time.time()-TimeIn |
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195 |
print("Copy from Host 2 Device : %.3f" % Elapsed) |
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196 |
|
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197 |
TimeIn=time.time() |
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198 |
# Definition of kernel under OpenCL |
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199 |
prg = cl.Program(ctx, """ |
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200 |
|
|
201 |
float MySillyFunction(float x) |
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202 |
{ |
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203 |
return(pow(sqrt(log(exp(atanh(tanh(asinh(sinh(acosh(cosh(atan(tan(asin(sin(acos(cos(x))))))))))))))),2)); |
|
204 |
} |
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205 |
|
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206 |
__kernel void sillysum( |
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207 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
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208 |
{ |
|
209 |
int gid = get_global_id(0); |
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210 |
res_g[gid] = MySillyFunction(a_g[gid]) + MySillyFunction(b_g[gid]); |
|
211 |
} |
|
212 |
|
|
213 |
__kernel void sum( |
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214 |
__global const float *a_g, __global const float *b_g, __global float *res_g) |
|
215 |
{ |
|
216 |
int gid = get_global_id(0); |
|
217 |
res_g[gid] = a_g[gid] + b_g[gid]; |
|
218 |
} |
|
219 |
""").build() |
|
220 |
Elapsed=time.time()-TimeIn |
|
221 |
print("Building kernels : %.3f" % Elapsed) |
|
222 |
|
|
223 |
TimeIn=time.time() |
|
224 |
# Memory allocation on Device for result |
|
225 |
res_g = cl.Buffer(ctx, mf.WRITE_ONLY, a_np.nbytes) |
|
226 |
Elapsed=time.time()-TimeIn |
|
227 |
print("Allocation on Device for results : %.3f" % Elapsed) |
|
228 |
|
|
229 |
TimeIn=time.time() |
|
230 |
# Synthesis of function "sillysum" inside Kernel Sources |
|
231 |
knl = prg.sillysum # Use this Kernel object for repeated calls |
|
232 |
Elapsed=time.time()-TimeIn |
|
233 |
print("Synthesis of kernel : %.3f" % Elapsed) |
|
234 |
|
|
235 |
TimeIn=time.time() |
|
236 |
# Call of kernel previously defined |
|
237 |
CallCL=knl(queue, a_np.shape, None, a_g, b_g, res_g) |
|
238 |
# |
|
239 |
CallCL.wait() |
|
240 |
Elapsed=time.time()-TimeIn |
|
241 |
print("Execution of kernel : %.3f" % Elapsed) |
|
242 |
|
|
243 |
TimeIn=time.time() |
|
244 |
# Creation of vector for result with same size as input vectors |
|
245 |
res_np = np.empty_like(a_np) |
|
246 |
Elapsed=time.time()-TimeIn |
|
247 |
print("Allocation on Host for results: %.3f" % Elapsed) |
|
248 |
|
|
249 |
TimeIn=time.time() |
|
250 |
# Copy from Device to Host |
|
251 |
cl.enqueue_copy(queue, res_np, res_g) |
|
252 |
Elapsed=time.time()-TimeIn |
|
253 |
print("Copy from Device 2 Host : %.3f" % Elapsed) |
|
254 |
|
|
255 |
return(res_np) |
|
256 |
|
|
257 |
import sys |
|
258 |
import time |
|
259 |
|
|
260 |
if __name__=='__main__': |
|
261 |
|
|
262 |
# Size of input vectors definition based on stdin |
|
263 |
import sys |
|
264 |
try: |
|
265 |
SIZE=int(sys.argv[1]) |
|
266 |
print("Size of vectors set to %i" % SIZE) |
|
267 |
except: |
|
268 |
SIZE=50000 |
|
269 |
print("Size of vectors set to default size %i" % SIZE) |
|
270 |
|
|
271 |
# a_np = np.random.rand(SIZE).astype(np.float32) |
|
272 |
# b_np = np.random.rand(SIZE).astype(np.float32) |
|
273 |
|
|
274 |
a_np = np.ones(SIZE).astype(np.float32) |
|
275 |
b_np = np.ones(SIZE).astype(np.float32) |
|
276 |
|
|
277 |
# Native & Naive Implementation |
|
278 |
print("Performing naive implementation") |
|
279 |
TimeIn=time.time() |
|
280 |
c_np,d_np=MyDFT(a_np,b_np) |
|
281 |
NativeElapsed=time.time()-TimeIn |
|
282 |
NativeRate=int(SIZE/NativeElapsed) |
|
283 |
print("NativeRate: %i" % NativeRate) |
|
284 |
|
|
285 |
# Native & Numpy Implementation |
|
286 |
print("Performing Numpy implementation") |
|
287 |
TimeIn=time.time() |
|
288 |
e_np,f_np=NumpyDFT(a_np,b_np) |
|
289 |
NumpyElapsed=time.time()-TimeIn |
|
290 |
NumpyRate=int(SIZE/NumpyElapsed) |
|
291 |
print("NumpyRate: %i" % NumpyRate) |
|
292 |
|
|
293 |
print(np.linalg.norm(c_np-e_np)) |
|
294 |
print(np.linalg.norm(d_np-f_np)) |
|
295 |
|
|
296 |
# Native & Numpy Implementation |
|
297 |
print("Performing Numba implementation") |
|
298 |
TimeIn=time.time() |
|
299 |
g_np,h_np=NumbaDFT(a_np,b_np) |
|
300 |
NumpyElapsed=time.time()-TimeIn |
|
301 |
NumpyRate=int(SIZE/NumpyElapsed) |
|
302 |
print("NumpyRate: %i" % NumpyRate) |
|
303 |
|
|
304 |
print(np.linalg.norm(c_np-g_np)) |
|
305 |
print(np.linalg.norm(d_np-h_np)) |
|
306 |
|
|
307 |
# # OpenCL Implementation |
|
308 |
# TimeIn=time.time() |
|
309 |
# # res_cl=OpenCLAddition(a_np,b_np) |
|
310 |
# res_cl=OpenCLSillyAddition(a_np,b_np) |
|
311 |
# OpenCLElapsed=time.time()-TimeIn |
|
312 |
# OpenCLRate=int(SIZE/OpenCLElapsed) |
|
313 |
# print("OpenCLRate: %i" % OpenCLRate) |
|
314 |
|
|
315 |
# # CUDA Implementation |
|
316 |
# TimeIn=time.time() |
|
317 |
# # res_cuda=CUDAAddition(a_np,b_np) |
|
318 |
# res_cuda=CUDASillyAddition(a_np,b_np) |
|
319 |
# CUDAElapsed=time.time()-TimeIn |
|
320 |
# CUDARate=int(SIZE/CUDAElapsed) |
|
321 |
# print("CUDARate: %i" % CUDARate) |
|
322 |
|
|
323 |
# print("OpenCLvsNative ratio: %f" % (OpenCLRate/NativeRate)) |
|
324 |
# print("CUDAvsNative ratio: %f" % (CUDARate/NativeRate)) |
|
325 |
|
|
326 |
# # Check on OpenCL with Numpy: |
|
327 |
# print(res_cl - res_np) |
|
328 |
# print(np.linalg.norm(res_cl - res_np)) |
|
329 |
# try: |
|
330 |
# assert np.allclose(res_np, res_cl) |
|
331 |
# except: |
|
332 |
# print("Results between Native & OpenCL seem to be too different!") |
|
333 |
|
|
334 |
# # Check on CUDA with Numpy: |
|
335 |
# print(res_cuda - res_np) |
|
336 |
# print(np.linalg.norm(res_cuda - res_np)) |
|
337 |
# try: |
|
338 |
# assert np.allclose(res_np, res_cuda) |
|
339 |
# except: |
|
340 |
# print("Results between Native & CUDA seem to be too different!") |
|
341 |
|
|
342 |
|
|
0 | 343 |
Formats disponibles : Unified diff