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/* Generated by Cython 0.15.1 on Sun May 26 16:17:32 2013 */
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#define PY_SSIZE_T_CLEAN
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#include "Python.h"
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#ifndef Py_PYTHON_H
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#error Python headers needed to compile C extensions, please install development version of Python.
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#else
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#include <stddef.h> /* For offsetof */
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#ifndef offsetof
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#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
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#endif
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#if !defined(WIN32) && !defined(MS_WINDOWS)
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#ifndef __stdcall
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#define __stdcall
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#endif
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#ifndef __cdecl
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#define __cdecl
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#endif
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#ifndef __fastcall
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#define __fastcall
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#endif
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#endif
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#ifndef DL_IMPORT
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#define DL_IMPORT(t) t
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#endif
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#ifndef DL_EXPORT
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#define DL_EXPORT(t) t
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#endif
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#ifndef PY_LONG_LONG
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#define PY_LONG_LONG LONG_LONG
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#endif
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#if PY_VERSION_HEX < 0x02040000
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#define METH_COEXIST 0
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#define PyDict_CheckExact(op) (Py_TYPE(op) == &PyDict_Type)
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#define PyDict_Contains(d,o) PySequence_Contains(d,o)
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#endif
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#if PY_VERSION_HEX < 0x02050000
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typedef int Py_ssize_t;
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#define PY_SSIZE_T_MAX INT_MAX
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#define PY_SSIZE_T_MIN INT_MIN
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#define PY_FORMAT_SIZE_T ""
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#define PyInt_FromSsize_t(z) PyInt_FromLong(z)
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#define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
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#define PyNumber_Index(o) PyNumber_Int(o)
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#define PyIndex_Check(o) PyNumber_Check(o)
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#define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
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#endif
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#if PY_VERSION_HEX < 0x02060000
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#define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
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#define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
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#define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
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#define PyVarObject_HEAD_INIT(type, size) \
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PyObject_HEAD_INIT(type) size,
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#define PyType_Modified(t)
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typedef struct {
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void *buf;
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PyObject *obj;
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Py_ssize_t len;
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Py_ssize_t itemsize;
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int readonly;
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int ndim;
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char *format;
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Py_ssize_t *shape;
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Py_ssize_t *strides;
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Py_ssize_t *suboffsets;
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void *internal;
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} Py_buffer;
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#define PyBUF_SIMPLE 0
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#define PyBUF_WRITABLE 0x0001
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#define PyBUF_FORMAT 0x0004
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#define PyBUF_ND 0x0008
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#define PyBUF_STRIDES (0x0010 | PyBUF_ND)
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#define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
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#define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
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#define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
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#define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
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#endif
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#if PY_MAJOR_VERSION < 3
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#define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
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#else
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#define __Pyx_BUILTIN_MODULE_NAME "builtins"
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define Py_TPFLAGS_CHECKTYPES 0
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#define Py_TPFLAGS_HAVE_INDEX 0
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#endif
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#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
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#define Py_TPFLAGS_HAVE_NEWBUFFER 0
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define PyBaseString_Type PyUnicode_Type
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#define PyStringObject PyUnicodeObject
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#define PyString_Type PyUnicode_Type
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#define PyString_Check PyUnicode_Check
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#define PyString_CheckExact PyUnicode_CheckExact
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#endif
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#if PY_VERSION_HEX < 0x02060000
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#define PyBytesObject PyStringObject
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#define PyBytes_Type PyString_Type
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#define PyBytes_Check PyString_Check
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#define PyBytes_CheckExact PyString_CheckExact
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#define PyBytes_FromString PyString_FromString
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#define PyBytes_FromStringAndSize PyString_FromStringAndSize
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#define PyBytes_FromFormat PyString_FromFormat
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#define PyBytes_DecodeEscape PyString_DecodeEscape
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#define PyBytes_AsString PyString_AsString
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#define PyBytes_AsStringAndSize PyString_AsStringAndSize
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#define PyBytes_Size PyString_Size
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#define PyBytes_AS_STRING PyString_AS_STRING
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#define PyBytes_GET_SIZE PyString_GET_SIZE
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#define PyBytes_Repr PyString_Repr
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#define PyBytes_Concat PyString_Concat
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#define PyBytes_ConcatAndDel PyString_ConcatAndDel
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#endif
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#if PY_VERSION_HEX < 0x02060000
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#define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
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#define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
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#endif
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#ifndef PySet_CheckExact
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#define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
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#endif
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#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
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#if PY_MAJOR_VERSION >= 3
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#define PyIntObject PyLongObject
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#define PyInt_Type PyLong_Type
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#define PyInt_Check(op) PyLong_Check(op)
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#define PyInt_CheckExact(op) PyLong_CheckExact(op)
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#define PyInt_FromString PyLong_FromString
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#define PyInt_FromUnicode PyLong_FromUnicode
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#define PyInt_FromLong PyLong_FromLong
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#define PyInt_FromSize_t PyLong_FromSize_t
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#define PyInt_FromSsize_t PyLong_FromSsize_t
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#define PyInt_AsLong PyLong_AsLong
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#define PyInt_AS_LONG PyLong_AS_LONG
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#define PyInt_AsSsize_t PyLong_AsSsize_t
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#define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
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#define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define PyBoolObject PyLongObject
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#endif
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#if PY_VERSION_HEX < 0x03020000
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typedef long Py_hash_t;
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#define __Pyx_PyInt_FromHash_t PyInt_FromLong
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#define __Pyx_PyInt_AsHash_t PyInt_AsLong
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#else
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#define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
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#define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
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#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
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#else
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#define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
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#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
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#endif
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#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
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#define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
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#define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
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#define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
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#else
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#define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
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(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
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(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
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(PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
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#define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
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(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
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(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
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(PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
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#define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
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(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
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(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_DelSlice(obj, a, b)) : \
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(PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice deletion", (obj)->ob_type->tp_name), -1)))
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#endif
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198 |
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#if PY_MAJOR_VERSION >= 3
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#define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
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#endif
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#if PY_VERSION_HEX < 0x02050000
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#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
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#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
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#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
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#else
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#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
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#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
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#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
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#endif
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#if PY_VERSION_HEX < 0x02050000
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#define __Pyx_NAMESTR(n) ((char *)(n))
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#define __Pyx_DOCSTR(n) ((char *)(n))
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#else
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#define __Pyx_NAMESTR(n) (n)
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#define __Pyx_DOCSTR(n) (n)
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#endif
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#ifndef __PYX_EXTERN_C
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#ifdef __cplusplus
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#define __PYX_EXTERN_C extern "C"
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#else
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#define __PYX_EXTERN_C extern
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#endif
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#endif
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#if defined(WIN32) || defined(MS_WINDOWS)
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#define _USE_MATH_DEFINES
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#endif
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#include <math.h>
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#define __PYX_HAVE__Metropolis
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#define __PYX_HAVE_API__Metropolis
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#ifdef _OPENMP
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#include <omp.h>
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#endif /* _OPENMP */
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#ifdef PYREX_WITHOUT_ASSERTIONS
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#define CYTHON_WITHOUT_ASSERTIONS
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#endif
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/* inline attribute */
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#ifndef CYTHON_INLINE
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#if defined(__GNUC__)
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#define CYTHON_INLINE __inline__
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#elif defined(_MSC_VER)
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#define CYTHON_INLINE __inline
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#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
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#define CYTHON_INLINE inline
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#else
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#define CYTHON_INLINE
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#endif
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#endif
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/* unused attribute */
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#ifndef CYTHON_UNUSED
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# if defined(__GNUC__)
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# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
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# define CYTHON_UNUSED __attribute__ ((__unused__))
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# else
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# define CYTHON_UNUSED
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# endif
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# elif defined(__ICC) || defined(__INTEL_COMPILER)
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# define CYTHON_UNUSED __attribute__ ((__unused__))
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# else
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# define CYTHON_UNUSED
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# endif
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#endif
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typedef struct {PyObject **p; char *s; const long n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; /*proto*/
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/* Type Conversion Predeclarations */
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#define __Pyx_PyBytes_FromUString(s) PyBytes_FromString((char*)s)
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#define __Pyx_PyBytes_AsUString(s) ((unsigned char*) PyBytes_AsString(s))
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#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None)
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#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False))
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static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*);
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static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x);
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static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*);
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static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t);
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static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject*);
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#define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x))
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#ifdef __GNUC__
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/* Test for GCC > 2.95 */
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#if __GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))
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#define likely(x) __builtin_expect(!!(x), 1)
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#define unlikely(x) __builtin_expect(!!(x), 0)
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#else /* __GNUC__ > 2 ... */
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#define likely(x) (x)
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299 |
#define unlikely(x) (x)
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300 |
#endif /* __GNUC__ > 2 ... */
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#else /* __GNUC__ */
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302 |
#define likely(x) (x)
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#define unlikely(x) (x)
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304 |
#endif /* __GNUC__ */
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static PyObject *__pyx_m;
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static PyObject *__pyx_b;
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static PyObject *__pyx_empty_tuple;
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static PyObject *__pyx_empty_bytes;
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310 |
static int __pyx_lineno;
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311 |
static int __pyx_clineno = 0;
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312 |
static const char * __pyx_cfilenm= __FILE__;
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313 |
static const char *__pyx_filename;
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314 |
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static const char *__pyx_f[] = {
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"Metropolis.pyx",
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};
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319 |
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320 |
/*--- Type declarations ---*/
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321 |
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322 |
#ifndef CYTHON_REFNANNY
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323 |
#define CYTHON_REFNANNY 0
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324 |
#endif
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325 |
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326 |
#if CYTHON_REFNANNY
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typedef struct {
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328 |
void (*INCREF)(void*, PyObject*, int);
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329 |
void (*DECREF)(void*, PyObject*, int);
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330 |
void (*GOTREF)(void*, PyObject*, int);
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331 |
void (*GIVEREF)(void*, PyObject*, int);
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332 |
void* (*SetupContext)(const char*, int, const char*);
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333 |
void (*FinishContext)(void**);
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334 |
} __Pyx_RefNannyAPIStruct;
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static __Pyx_RefNannyAPIStruct *__Pyx_RefNanny = NULL;
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static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname); /*proto*/
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#define __Pyx_RefNannyDeclarations void *__pyx_refnanny = NULL;
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#define __Pyx_RefNannySetupContext(name) __pyx_refnanny = __Pyx_RefNanny->SetupContext((name), __LINE__, __FILE__)
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#define __Pyx_RefNannyFinishContext() __Pyx_RefNanny->FinishContext(&__pyx_refnanny)
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#define __Pyx_INCREF(r) __Pyx_RefNanny->INCREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
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#define __Pyx_DECREF(r) __Pyx_RefNanny->DECREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
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#define __Pyx_GOTREF(r) __Pyx_RefNanny->GOTREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
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#define __Pyx_GIVEREF(r) __Pyx_RefNanny->GIVEREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
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#define __Pyx_XINCREF(r) do { if((r) != NULL) {__Pyx_INCREF(r); }} while(0)
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345 |
#define __Pyx_XDECREF(r) do { if((r) != NULL) {__Pyx_DECREF(r); }} while(0)
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static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[], PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, const char* function_name); /*proto*/
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static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject *);
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static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject *);
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static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject *);
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static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject *);
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static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject *);
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static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject *);
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static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject *);
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static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject *);
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static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject *);
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407 |
|
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408 |
static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject *);
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|
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410 |
static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject *);
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411 |
|
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412 |
static int __Pyx_check_binary_version(void);
|
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413 |
|
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static void __Pyx_AddTraceback(const char *funcname, int __pyx_clineno,
|
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int __pyx_lineno, const char *__pyx_filename); /*proto*/
|
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416 |
|
|
417 |
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); /*proto*/
|
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418 |
|
|
419 |
/* Module declarations from 'Metropolis' */
|
|
420 |
#define __Pyx_MODULE_NAME "Metropolis"
|
|
421 |
int __pyx_module_is_main_Metropolis = 0;
|
|
422 |
|
|
423 |
/* Implementation of 'Metropolis' */
|
|
424 |
static PyObject *__pyx_builtin_xrange;
|
|
425 |
static char __pyx_k_1[] = "matplotlib.pyplot";
|
|
426 |
static char __pyx_k_2[] = "*";
|
|
427 |
static char __pyx_k__B[] = "B";
|
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428 |
static char __pyx_k__J[] = "J";
|
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429 |
static char __pyx_k__T[] = "T";
|
|
430 |
static char __pyx_k__PIL[] = "PIL";
|
|
431 |
static char __pyx_k__exp[] = "exp";
|
|
432 |
static char __pyx_k__plt[] = "plt";
|
|
433 |
static char __pyx_k__sys[] = "sys";
|
|
434 |
static char __pyx_k__math[] = "math";
|
|
435 |
static char __pyx_k__time[] = "time";
|
|
436 |
static char __pyx_k__Image[] = "Image";
|
|
437 |
static char __pyx_k__numpy[] = "numpy";
|
|
438 |
static char __pyx_k__range[] = "range";
|
|
439 |
static char __pyx_k__shape[] = "shape";
|
|
440 |
static char __pyx_k__sigma[] = "sigma";
|
|
441 |
static char __pyx_k__getopt[] = "getopt";
|
|
442 |
static char __pyx_k__random[] = "random";
|
|
443 |
static char __pyx_k__xrange[] = "xrange";
|
|
444 |
static char __pyx_k__randint[] = "randint";
|
|
445 |
static char __pyx_k____main__[] = "__main__";
|
|
446 |
static char __pyx_k____test__[] = "__test__";
|
|
447 |
static char __pyx_k__Metropolis[] = "Metropolis";
|
|
448 |
static char __pyx_k__iterations[] = "iterations";
|
|
449 |
static PyObject *__pyx_n_s_1;
|
|
450 |
static PyObject *__pyx_n_s_2;
|
|
451 |
static PyObject *__pyx_n_s__B;
|
|
452 |
static PyObject *__pyx_n_s__Image;
|
|
453 |
static PyObject *__pyx_n_s__J;
|
|
454 |
static PyObject *__pyx_n_s__Metropolis;
|
|
455 |
static PyObject *__pyx_n_s__PIL;
|
|
456 |
static PyObject *__pyx_n_s__T;
|
|
457 |
static PyObject *__pyx_n_s____main__;
|
|
458 |
static PyObject *__pyx_n_s____test__;
|
|
459 |
static PyObject *__pyx_n_s__exp;
|
|
460 |
static PyObject *__pyx_n_s__getopt;
|
|
461 |
static PyObject *__pyx_n_s__iterations;
|
|
462 |
static PyObject *__pyx_n_s__math;
|
|
463 |
static PyObject *__pyx_n_s__numpy;
|
|
464 |
static PyObject *__pyx_n_s__plt;
|
|
465 |
static PyObject *__pyx_n_s__randint;
|
|
466 |
static PyObject *__pyx_n_s__random;
|
|
467 |
static PyObject *__pyx_n_s__range;
|
|
468 |
static PyObject *__pyx_n_s__shape;
|
|
469 |
static PyObject *__pyx_n_s__sigma;
|
|
470 |
static PyObject *__pyx_n_s__sys;
|
|
471 |
static PyObject *__pyx_n_s__time;
|
|
472 |
static PyObject *__pyx_n_s__xrange;
|
|
473 |
static PyObject *__pyx_int_0;
|
|
474 |
static PyObject *__pyx_int_1;
|
|
475 |
static PyObject *__pyx_int_2;
|
|
476 |
|
|
477 |
/* "Metropolis.pyx":17
|
|
478 |
* import Metropolis
|
|
479 |
*
|
|
480 |
* def Metropolis(sigma,J,B,T,iterations): # <<<<<<<<<<<<<<
|
|
481 |
* start=time.time()
|
|
482 |
*
|
|
483 |
*/
|
|
484 |
|
|
485 |
static PyObject *__pyx_pf_10Metropolis_Metropolis(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
486 |
static PyMethodDef __pyx_mdef_10Metropolis_Metropolis = {__Pyx_NAMESTR("Metropolis"), (PyCFunction)__pyx_pf_10Metropolis_Metropolis, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)};
|
|
487 |
static PyObject *__pyx_pf_10Metropolis_Metropolis(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
488 |
PyObject *__pyx_v_sigma = 0;
|
|
489 |
PyObject *__pyx_v_J = 0;
|
|
490 |
PyObject *__pyx_v_B = 0;
|
|
491 |
PyObject *__pyx_v_T = 0;
|
|
492 |
PyObject *__pyx_v_iterations = 0;
|
|
493 |
PyObject *__pyx_v_start = NULL;
|
|
494 |
PyObject *__pyx_v_SizeX = NULL;
|
|
495 |
PyObject *__pyx_v_SizeY = NULL;
|
|
496 |
PyObject *__pyx_v_p = NULL;
|
|
497 |
PyObject *__pyx_v_X = NULL;
|
|
498 |
PyObject *__pyx_v_Y = NULL;
|
|
499 |
PyObject *__pyx_v_DeltaE = NULL;
|
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500 |
PyObject *__pyx_v_duration = NULL;
|
|
501 |
PyObject *__pyx_r = NULL;
|
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502 |
__Pyx_RefNannyDeclarations
|
|
503 |
PyObject *__pyx_t_1 = NULL;
|
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504 |
PyObject *__pyx_t_2 = NULL;
|
|
505 |
PyObject *__pyx_t_3 = NULL;
|
|
506 |
PyObject *__pyx_t_4 = NULL;
|
|
507 |
PyObject *(*__pyx_t_5)(PyObject *);
|
|
508 |
Py_ssize_t __pyx_t_6;
|
|
509 |
PyObject *(*__pyx_t_7)(PyObject *);
|
|
510 |
PyObject *__pyx_t_8 = NULL;
|
|
511 |
int __pyx_t_9;
|
|
512 |
int __pyx_t_10;
|
|
513 |
int __pyx_t_11;
|
|
514 |
int __pyx_lineno = 0;
|
|
515 |
const char *__pyx_filename = NULL;
|
|
516 |
int __pyx_clineno = 0;
|
|
517 |
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__sigma,&__pyx_n_s__J,&__pyx_n_s__B,&__pyx_n_s__T,&__pyx_n_s__iterations,0};
|
|
518 |
__Pyx_RefNannySetupContext("Metropolis");
|
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519 |
__pyx_self = __pyx_self;
|
|
520 |
{
|
|
521 |
PyObject* values[5] = {0,0,0,0,0};
|
|
522 |
if (unlikely(__pyx_kwds)) {
|
|
523 |
Py_ssize_t kw_args;
|
|
524 |
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
525 |
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
526 |
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
527 |
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
528 |
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
529 |
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
530 |
case 0: break;
|
|
531 |
default: goto __pyx_L5_argtuple_error;
|
|
532 |
}
|
|
533 |
kw_args = PyDict_Size(__pyx_kwds);
|
|
534 |
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
535 |
case 0:
|
|
536 |
values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__sigma);
|
|
537 |
if (likely(values[0])) kw_args--;
|
|
538 |
else goto __pyx_L5_argtuple_error;
|
|
539 |
case 1:
|
|
540 |
values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__J);
|
|
541 |
if (likely(values[1])) kw_args--;
|
|
542 |
else {
|
|
543 |
__Pyx_RaiseArgtupleInvalid("Metropolis", 1, 5, 5, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
544 |
}
|
|
545 |
case 2:
|
|
546 |
values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__B);
|
|
547 |
if (likely(values[2])) kw_args--;
|
|
548 |
else {
|
|
549 |
__Pyx_RaiseArgtupleInvalid("Metropolis", 1, 5, 5, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
550 |
}
|
|
551 |
case 3:
|
|
552 |
values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__T);
|
|
553 |
if (likely(values[3])) kw_args--;
|
|
554 |
else {
|
|
555 |
__Pyx_RaiseArgtupleInvalid("Metropolis", 1, 5, 5, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
556 |
}
|
|
557 |
case 4:
|
|
558 |
values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__iterations);
|
|
559 |
if (likely(values[4])) kw_args--;
|
|
560 |
else {
|
|
561 |
__Pyx_RaiseArgtupleInvalid("Metropolis", 1, 5, 5, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
562 |
}
|
|
563 |
}
|
|
564 |
if (unlikely(kw_args > 0)) {
|
|
565 |
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "Metropolis") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
566 |
}
|
|
567 |
} else if (PyTuple_GET_SIZE(__pyx_args) != 5) {
|
|
568 |
goto __pyx_L5_argtuple_error;
|
|
569 |
} else {
|
|
570 |
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
571 |
values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
572 |
values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
573 |
values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
574 |
values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
575 |
}
|
|
576 |
__pyx_v_sigma = values[0];
|
|
577 |
__pyx_v_J = values[1];
|
|
578 |
__pyx_v_B = values[2];
|
|
579 |
__pyx_v_T = values[3];
|
|
580 |
__pyx_v_iterations = values[4];
|
|
581 |
}
|
|
582 |
goto __pyx_L4_argument_unpacking_done;
|
|
583 |
__pyx_L5_argtuple_error:;
|
|
584 |
__Pyx_RaiseArgtupleInvalid("Metropolis", 1, 5, 5, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
585 |
__pyx_L3_error:;
|
|
586 |
__Pyx_AddTraceback("Metropolis.Metropolis", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
587 |
__Pyx_RefNannyFinishContext();
|
|
588 |
return NULL;
|
|
589 |
__pyx_L4_argument_unpacking_done:;
|
|
590 |
|
|
591 |
/* "Metropolis.pyx":18
|
|
592 |
*
|
|
593 |
* def Metropolis(sigma,J,B,T,iterations):
|
|
594 |
* start=time.time() # <<<<<<<<<<<<<<
|
|
595 |
*
|
|
596 |
* SizeX,SizeY=sigma.shape
|
|
597 |
*/
|
|
598 |
__pyx_t_1 = __Pyx_GetName(__pyx_m, __pyx_n_s__time); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 18; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
599 |
__Pyx_GOTREF(__pyx_t_1);
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|
|
601 |
__Pyx_GOTREF(__pyx_t_2);
|
|
602 |
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
603 |
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|
|
604 |
__Pyx_GOTREF(__pyx_t_1);
|
|
605 |
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
606 |
__pyx_v_start = __pyx_t_1;
|
|
607 |
__pyx_t_1 = 0;
|
|
608 |
|
|
609 |
/* "Metropolis.pyx":20
|
|
610 |
* start=time.time()
|
|
611 |
*
|
|
612 |
* SizeX,SizeY=sigma.shape # <<<<<<<<<<<<<<
|
|
613 |
*
|
|
614 |
* for p in xrange(0,iterations):
|
|
615 |
*/
|
|
616 |
__pyx_t_1 = PyObject_GetAttr(__pyx_v_sigma, __pyx_n_s__shape); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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617 |
__Pyx_GOTREF(__pyx_t_1);
|
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618 |
if ((likely(PyTuple_CheckExact(__pyx_t_1))) || (PyList_CheckExact(__pyx_t_1))) {
|
|
619 |
PyObject* sequence = __pyx_t_1;
|
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620 |
if (likely(PyTuple_CheckExact(sequence))) {
|
|
621 |
if (unlikely(PyTuple_GET_SIZE(sequence) != 2)) {
|
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622 |
if (PyTuple_GET_SIZE(sequence) > 2) __Pyx_RaiseTooManyValuesError(2);
|
|
623 |
else __Pyx_RaiseNeedMoreValuesError(PyTuple_GET_SIZE(sequence));
|
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624 |
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
625 |
}
|
|
626 |
__pyx_t_2 = PyTuple_GET_ITEM(sequence, 0);
|
|
627 |
__pyx_t_3 = PyTuple_GET_ITEM(sequence, 1);
|
|
628 |
} else {
|
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629 |
if (unlikely(PyList_GET_SIZE(sequence) != 2)) {
|
|
630 |
if (PyList_GET_SIZE(sequence) > 2) __Pyx_RaiseTooManyValuesError(2);
|
|
631 |
else __Pyx_RaiseNeedMoreValuesError(PyList_GET_SIZE(sequence));
|
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632 |
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
633 |
}
|
|
634 |
__pyx_t_2 = PyList_GET_ITEM(sequence, 0);
|
|
635 |
__pyx_t_3 = PyList_GET_ITEM(sequence, 1);
|
|
636 |
}
|
|
637 |
__Pyx_INCREF(__pyx_t_2);
|
|
638 |
__Pyx_INCREF(__pyx_t_3);
|
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639 |
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
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__Pyx_GOTREF(__pyx_t_4);
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goto __pyx_L7_unpacking_done;
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__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
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if (!PyErr_Occurred()) __Pyx_RaiseNeedMoreValuesError(index);
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{__pyx_filename = __pyx_f[0]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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/* "Metropolis.pyx":22
|
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* SizeX,SizeY=sigma.shape
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*
|
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* for p in xrange(0,iterations): # <<<<<<<<<<<<<<
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* # Random access coordonate
|
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670 |
* X,Y=numpy.random.randint(SizeX),numpy.random.randint(SizeY)
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*/
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__Pyx_INCREF(__pyx_int_0);
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PyTuple_SET_ITEM(__pyx_t_1, 0, __pyx_int_0);
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__Pyx_GIVEREF(__pyx_int_0);
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__Pyx_INCREF(__pyx_v_iterations);
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PyTuple_SET_ITEM(__pyx_t_1, 1, __pyx_v_iterations);
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/* "Metropolis.pyx":24
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* # Random access coordonate
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__Pyx_GIVEREF(__pyx_v_SizeY);
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__Pyx_GOTREF(__pyx_t_8);
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__Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0;
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/* "Metropolis.pyx":26
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* X,Y=numpy.random.randint(SizeX),numpy.random.randint(SizeY)
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*
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* DeltaE=J*sigma[X,Y]*(2*(sigma[X,(Y+1)%SizeY]+ # <<<<<<<<<<<<<<
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* sigma[X,(Y-1)%SizeY]+
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* sigma[(X-1)%SizeX,Y]+
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*/
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__Pyx_GIVEREF(__pyx_v_X);
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__Pyx_INCREF(__pyx_v_Y);
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PyTuple_SET_ITEM(__pyx_t_8, 1, __pyx_v_Y);
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__Pyx_GIVEREF(__pyx_v_Y);
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__pyx_t_4 = PyObject_GetItem(__pyx_v_sigma, ((PyObject *)__pyx_t_8)); if (!__pyx_t_4) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_4);
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__Pyx_DECREF(((PyObject *)__pyx_t_8)); __pyx_t_8 = 0;
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/* "Metropolis.pyx":27
|
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785 |
*
|
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786 |
* DeltaE=J*sigma[X,Y]*(2*(sigma[X,(Y+1)%SizeY]+
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* sigma[X,(Y-1)%SizeY]+ # <<<<<<<<<<<<<<
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* sigma[(X-1)%SizeX,Y]+
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792 |
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793 |
|
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/* "Metropolis.pyx":26
|
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* X,Y=numpy.random.randint(SizeX),numpy.random.randint(SizeY)
|
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796 |
*
|
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797 |
* DeltaE=J*sigma[X,Y]*(2*(sigma[X,(Y+1)%SizeY]+ # <<<<<<<<<<<<<<
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798 |
* sigma[X,(Y-1)%SizeY]+
|
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799 |
* sigma[(X-1)%SizeX,Y]+
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*/
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__pyx_t_3 = PyNumber_Remainder(__pyx_t_4, __pyx_v_SizeY); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_3);
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__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
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805 |
__Pyx_GOTREF(((PyObject *)__pyx_t_4));
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__Pyx_INCREF(__pyx_v_X);
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PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_X);
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__Pyx_GIVEREF(__pyx_v_X);
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PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_t_3);
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__Pyx_GIVEREF(__pyx_t_3);
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811 |
__pyx_t_3 = 0;
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813 |
__Pyx_GOTREF(__pyx_t_3);
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815 |
|
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816 |
/* "Metropolis.pyx":27
|
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817 |
*
|
|
818 |
* DeltaE=J*sigma[X,Y]*(2*(sigma[X,(Y+1)%SizeY]+
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819 |
* sigma[X,(Y-1)%SizeY]+ # <<<<<<<<<<<<<<
|
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820 |
* sigma[(X-1)%SizeX,Y]+
|
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* sigma[(X+1)%SizeX,Y])+B)
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*/
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__pyx_t_4 = PyNumber_Subtract(__pyx_v_Y, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_4);
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825 |
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__Pyx_GOTREF(__pyx_t_2);
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__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
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830 |
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832 |
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833 |
PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_t_2);
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__Pyx_GIVEREF(__pyx_t_2);
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__pyx_t_2 = PyObject_GetItem(__pyx_v_sigma, ((PyObject *)__pyx_t_4)); if (!__pyx_t_2) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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837 |
__Pyx_GOTREF(__pyx_t_2);
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__Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0;
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__pyx_t_4 = PyNumber_Add(__pyx_t_3, __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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840 |
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__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
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843 |
|
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/* "Metropolis.pyx":28
|
|
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* DeltaE=J*sigma[X,Y]*(2*(sigma[X,(Y+1)%SizeY]+
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846 |
* sigma[X,(Y-1)%SizeY]+
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847 |
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|
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*/
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|
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/* "Metropolis.pyx":13
|
|
1291 |
* from random import random
|
|
1292 |
* import time
|
|
1293 |
* import getopt # <<<<<<<<<<<<<<
|
|
1294 |
* import matplotlib.pyplot as plt
|
|
1295 |
* import Metropolis
|
|
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*/
|
|
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|
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/* "Metropolis.pyx":14
|
|
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* import time
|
|
1304 |
* import getopt
|
|
1305 |
* import matplotlib.pyplot as plt # <<<<<<<<<<<<<<
|
|
1306 |
* import Metropolis
|
|
1307 |
*
|
|
1308 |
*/
|
|
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|
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1318 |
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
1319 |
|
|
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/* "Metropolis.pyx":15
|
|
1321 |
* import getopt
|
|
1322 |
* import matplotlib.pyplot as plt
|
|
1323 |
* import Metropolis # <<<<<<<<<<<<<<
|
|
1324 |
*
|
|
1325 |
* def Metropolis(sigma,J,B,T,iterations):
|
|
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*/
|
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|
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|
|
1331 |
|
|
1332 |
/* "Metropolis.pyx":17
|
|
1333 |
* import Metropolis
|
|
1334 |
*
|
|
1335 |
* def Metropolis(sigma,J,B,T,iterations): # <<<<<<<<<<<<<<
|
|
1336 |
* start=time.time()
|
|
1337 |
*
|
|
1338 |
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|
|
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|
|
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|
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/* "Metropolis.pyx":1
|
|
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* #!/usr/bin/env python # <<<<<<<<<<<<<<
|
|
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* #
|
|
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|
|
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*/
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1368 |
return __pyx_m;
|
|
1369 |
#endif
|
|
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}
|
|
1371 |
|
|
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/* Runtime support code */
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return (__Pyx_RefNannyAPIStruct *)r;
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static PyObject *__Pyx_GetName(PyObject *dict, PyObject *name) {
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PyObject *result;
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PyErr_SetObject(PyExc_NameError, name);
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1404 |
|
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1405 |
static void __Pyx_RaiseArgtupleInvalid(
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|
1406 |
const char* func_name,
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1407 |
int exact,
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Py_ssize_t num_min,
|
|
1409 |
Py_ssize_t num_max,
|
|
1410 |
Py_ssize_t num_found)
|
|
1411 |
{
|
|
1412 |
Py_ssize_t num_expected;
|
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1413 |
const char *more_or_less;
|
|
1414 |
|
|
1415 |
if (num_found < num_min) {
|
|
1416 |
num_expected = num_min;
|
|
1417 |
more_or_less = "at least";
|
|
1418 |
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|
|
1419 |
num_expected = num_max;
|
|
1420 |
more_or_less = "at most";
|
|
1421 |
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|
|
1422 |
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|
|
1423 |
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|
|
1424 |
}
|
|
1425 |
PyErr_Format(PyExc_TypeError,
|
|
1426 |
"%s() takes %s %"PY_FORMAT_SIZE_T"d positional argument%s (%"PY_FORMAT_SIZE_T"d given)",
|
|
1427 |
func_name, more_or_less, num_expected,
|
|
1428 |
(num_expected == 1) ? "" : "s", num_found);
|
|
1429 |
}
|
|
1430 |
|
|
1431 |
static void __Pyx_RaiseDoubleKeywordsError(
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|
1432 |
const char* func_name,
|
|
1433 |
PyObject* kw_name)
|
|
1434 |
{
|
|
1435 |
PyErr_Format(PyExc_TypeError,
|
|
1436 |
#if PY_MAJOR_VERSION >= 3
|
|
1437 |
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|
|
1438 |
#else
|
|
1439 |
"%s() got multiple values for keyword argument '%s'", func_name,
|
|
1440 |
PyString_AS_STRING(kw_name));
|
|
1441 |
#endif
|
|
1442 |
}
|
|
1443 |
|
|
1444 |
static int __Pyx_ParseOptionalKeywords(
|
|
1445 |
PyObject *kwds,
|
|
1446 |
PyObject **argnames[],
|
|
1447 |
PyObject *kwds2,
|
|
1448 |
PyObject *values[],
|
|
1449 |
Py_ssize_t num_pos_args,
|
|
1450 |
const char* function_name)
|
|
1451 |
{
|